Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1474 ATGCTTGGGTCAAATGTATTACCTGTGCCTTCTCTAATGCTTACTTTCATGCATTGGACACTTAATCTTCATCTTCGATTTGTTCATGTTGTTCAAAGACTTGGAAGACAAGAGAGAGCAACACTAAAATTGGTTCTTCAATTGATGAGTATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTAATTTACAGATGTACAGGAGCAAGAAGGTAGAGGACACAAATCATCAAGGAATGGGAAAGACACTAGCTTCTAATCATAGCAGTAACAAATCTAGGCTAAAAATGAAAGTTAGTCTACTTTTAAATTCTTAG 315 0.3524 MLGSNVLPVPSLMLTFMHWTLNLHLRFVHVVQRLGRQERATLKLVLQLMSIKGLSIAHVKSNLQMYRSKKVEDTNHQGMGKTLASNHSSNKSRLKMKVSLLLNS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1474 104 Gene3D - 15 72 - -
Amo07g1474 104 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 70 IPR006447 GO:0003677
Amo07g1474 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 18 97 IPR044848 GO:0003700
Amo07g1474 104 SUPERFAMILY Homeodomain-like 16 69 IPR009057 -
Amo07g1474 104 MobiDBLite consensus disorder prediction 72 92 - -
Amo07g1474 104 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN-RELATED 18 97 - -
Amo07g1474 104 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1474 Amo-Chr7 40393547 40395162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1474 17 88 G2-like Transcription Factor Family AT2G42660 58.333 6.81e-24 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo07g1474 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1474 - - adu:107484994 107.071