Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1469 ATGATGGCAGGTAGTGGACAACTAACAGTTCCACCAGGGTTCCGGTTCCATCCAACTGATGAGGAGCTTCTCTACTATTACCTAAGGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATTAGAGAGGTTGATCTCAACAAACTTGAACCTTGGGACCTCAAAGATAAATGCAGAATAGGATCAGGGCCTCAGAACGAGTGGTATTTCTTCAGTCACAAAGACAAGAAGTACCCAACAGGAACAAGGACCAATAGGGCAACCACTGCTGGTTTCTGGAAAGCCACTGGGAGGGACAAGGCCATATACCATACTAGCAATTCCAAGAGGATTGGGATGAGAAAAACCCTAGTTTTCTACACCGGCCGTGCGCCCCACGGCCAGAAGACTGACTGGATCATGCATGAGTACCGCCTCGACGAAGACGACGCCGAGGTTCAGGAGGATGGGTGGGTCGTGTGCAGGGTTTTCAAGAAGAAAAACCAAAGCAGAGGGTTTCGACAAGAAATTGAAGAAGAGGAACATCATCACTTAGCAGCAGCACATCAACACATGAGAGGAGTAGCAAGCCAACAAGTTCTGGACCCAAAACACCACCACCACTTGCAACATCATCAAGGACTCTATGATAATGAAAATAATAATAATTACACCAATAATTTTGATGGATCCATGCATCTTCCACAGTTGTTCAGTCCAGAATCTTCCGTGGCTACCGTGGCGGCGCACACTTCCATGAATGCCATGGACATTCTTGAATGCTCCCAGAACCTTCTAAGGCTCACAACAACAAGTGGATGTGGACTCAATCTCATGCAACAACAACATGGAGAGAGGTTCAATGGTGATTGGTCTTTCTTGGATAAGCTTCTTGCTTCACACCATGGCAGCACCATGGATCATCATCAGCATCATCATCATCATAGCAAATGTAACAATAATCTTCATCATCAGCATYCTGCAATTGCTATTGGAACTACTTCATCTCAGAAATTCCCATTTCACCACCTTGGTTGTGACAACCATGATATCATGAAGTTTTCCAAGTAG 1053 0.4501 MMAGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNQSRGFRQEIEEEEHHHLAAAHQHMRGVASQQVLDPKHHHHLQHHQGLYDNENNNNYTNNFDGSMHLPQLFSPESSVATVAAHTSMNAMDILECSQNLLRLTTTSGCGLNLMQQQHGERFNGDWSFLDKLLASHHGSTMDHHQHHHHHSKCNNNLHHQHXAIAIGTTSSQKFPFHHLGCDNHDIMKFSK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1469 350 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
Amo07g1469 350 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Amo07g1469 350 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Amo07g1469 350 PANTHER PROTEIN SOMBRERO 6 316 - -
Amo07g1469 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 316 - -
Amo07g1469 350 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1469 Amo-Chr7 40318298 40321020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1469 2 350 NAC Transcription Factor Family AT1G79580 56.728 2.51e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo07g1469 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1469 - - adu:107458804 669.848