Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1454 ATGTTGAGTGTAGTGGTGTATGTTGTTTCACAATTAACTCCCATTGAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGCGACACTGATTCTTCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCATAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCTGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTAAACTAA 243 0.4362 MLSVVVYVVSQLTPIEEGALGNIPTIAFCDTDSSMRYVDVGIPANNKGKHSIGCLFWLLARMVLLRGTIRPGLKWDVMVN* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1454 80 PANTHER 40S RIBOSOMAL PROTEIN SA 14 79 IPR005707 GO:0003735|GO:0006412|GO:0015935
Amo07g1454 80 PANTHER 40S RIBOSOMAL PROTEIN SA 14 79 - -
Amo07g1454 80 SUPERFAMILY Ribosomal protein S2 4 79 IPR023591 -
Amo07g1454 80 Gene3D - 1 80 - -
Amo07g1454 80 Pfam Ribosomal protein S2 6 62 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1454 80 PRINTS Ribosomal protein S2 signature 17 28 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1454 80 PRINTS Ribosomal protein S2 signature 38 52 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1454 Amo-Chr7 39922887 39923218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1454 14 80 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 83.824 1.29e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1454 K02998 - aof:109845665 129.798