Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1453 ATGGCCACTTCCGCCGCCACAAATGCCACAGTGTCGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGACGAGGTTCATCTCGGAACCAAAAACTGTGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATTGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACGGGTGCAAATGCAATTGATGGAAGGCACACTCCTGGAACATAA 345 0.487 MATSAATNATVSRQLSQKEQDIQMMLADEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIDGRHTPGT* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1453 114 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1453 114 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1453 114 PRINTS Ribosomal protein S2 signature 101 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1453 114 CDD RPS2 25 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo07g1453 114 PANTHER 40S RIBOSOMAL PROTEIN SA 6 114 - -
Amo07g1453 114 SUPERFAMILY Ribosomal protein S2 17 114 IPR023591 -
Amo07g1453 114 Gene3D - 21 114 - -
Amo07g1453 114 PANTHER 40S RIBOSOMAL PROTEIN SA 6 114 IPR005707 GO:0003735|GO:0006412|GO:0015935
Amo07g1453 114 Pfam Ribosomal protein S2 25 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1453 Amo-Chr7 39921969 39922798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1453 6 114 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 85.455 1.09e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1453 K02998 - pvy:116138910 202.601