Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1449 ATGAATAAAGGAGGTCCAGTAGGTGGAGGAGGGTTGGGGGTTGGTGGAAGCGGGCCTACTGCAGCGGCTGCTGCAGCTGCTGCTCAGAAGCAGAAGACATTGCTGCAGAGGGTGGAAGGTGACATTGCCAATATTGTGGACAATTTCAGCCACCTTGTCAATGTTGCCAGGGTTAATGATCCACCTGTTAGAAATTCACAAGAATCTTTTATGATGGAGATGCGTGCTGCTAGGATGGTTCAGGCAGCTGATTCGTTACTTAAGTTGGTCTCGGAGCTGAAGCAAACAGCTATCTTTTCAGGGTTTGCTTCTCTTAATGACCATGTAGAACAAAGAAGGGTTGAATTTAACGAACTCGGGGAGAAAACTGATCGTTTATTGTCTAGAATTGGAGAGGAAGCTGCTGCAAGTCTTAAGGAACTTGAAACTCATTATTCTTCTTCTGCGCAGAAGAATATTCAAAACCTTAAACCATAG 477 0.4507 MNKGGPVGGGGLGVGGSGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRRVEFNELGEKTDRLLSRIGEEAAASLKELETHYSSSAQKNIQNLKP* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1449 158 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 36 135 IPR009332 GO:0003712|GO:0006357|GO:0016592
Amo07g1449 158 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 1 153 IPR009332 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1449 Amo-Chr7 39822520 39826672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1449 K15139 - gmx:100807971 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2761 18 117362992 117367396 Amo07g1449 07 39822520 39826672 hybridization