Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1439 ATGGATCATTCAACCTCAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGACGCTCGGGTGTAGATCAATTCTTCTTTGGGTGTATTATATCAGACATGATTGGGTGTTTCTGACACGGTGTATTGTGCAGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACGATAGAGAATAACGAGGAGGCCGATCTGTACGAAGACCGTCACATATGGGTTCCTATCTATCTGGATCACCACTTCTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTACATCACCCGGAACAGCTCGCTTATTCAGTTCGTCAAACAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGCGTACACTCACGCAAAGTTTAGGGAAGTCCAAGCGCAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAAAGAATTCCGCTCTAGGCTATTCAGTATACGAAGTCGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTCGCGGTTACCTACGACTCAGTTGCAGCCGAGGTAAAATGCCAATGCTTATTATTCGAGTCGAGAGGGATACTGTGCCGTCACGCACTAAGCGTGTTAAGCTTCGAACAAGTAAAGAGGCGACACACACACATCAAGAGCAGCCACGACGAGCCACTAATGGAGCCAAGAAGCAAGAGGTTCGACCAATTGGTTTTTCGTTCGCAAAATATTTGCGAATTTGCCTCCGAATCGGAGGAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTCATGGCCGAGATGGAAGCATTAAAAGCCAAAAGGAAGGGGACATCTTCTTTATCCCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCGCCAAGGATTCGAACAAGAGGACGTCCAAAAAACAGGCTAGGTTCAAAGTTGGAGAAACAGATTGCAAATGCCACAAAGAAGAAGAAGACGAAAGTTTTAAGCGAGATAAACCTGTTTGATGCTGCATCAGCGGCGCATTCAAATTCCAGCCAATATCAAGGACACGTTATAAATTATCAGTTCAGGGTACCAGCAGCAGGGGATAACTCTTTGGGTGTATAG 1575 0.4546 MDHSTSDCQLNPGEVDYEFESNEVPETLGCRSILLWVYYIRHDWVFLTRCIVQPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEADLYEDRHIWVPIYLDHHFWAGMRSTQRSESMHSFFNKYITRNSSLIQFVKQYDNCLGSREQAERESDAADFHTVIPCATKSSIEAQFQDAYTHAKFREVQAQFRGKANCITRLKNSALGYSVYEVGEQVSSSIFNKFAVTYDSVAAEVKCQCLLFESRGILCRHALSVLSFEQVKRRHTHIKSSHDEPLMEPRSKRFDQLVFRSQNICEFASESEELTAILHRAYDNVMAEMEALKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLEKQIANATKKKKTKVLSEINLFDAASAAHSNSSQYQGHVINYQFRVPAAGDNSLGV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1439 524 MobiDBLite consensus disorder prediction 431 465 - -
Amo07g1439 524 MobiDBLite consensus disorder prediction 437 451 - -
Amo07g1439 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 191 364 IPR031052 GO:0006355
Amo07g1439 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 175 IPR031052 GO:0006355
Amo07g1439 524 SMART 26again6 338 365 IPR006564 GO:0008270
Amo07g1439 524 Pfam FAR1 DNA-binding domain 78 163 IPR004330 -
Amo07g1439 524 PANTHER OS03G0843700 PROTEIN 191 364 - -
Amo07g1439 524 PANTHER OS03G0843700 PROTEIN 59 175 - -
Amo07g1439 524 ProSiteProfiles Zinc finger SWIM-type profile. 327 363 IPR007527 GO:0008270
Amo07g1439 524 Pfam SWIM zinc finger 336 360 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1439 Amo-Chr7 39290153 39293207 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1439 FAR1 1.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1439 - - adu:110280503 615.92