Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1411 ATGCTAGTCTTTTACTTTTTTATTCCTAGTTTGACATTGTTGAAGAGAAGGTGTAGAGAACTCAGCATCAATCGCTGGCCTCATAGGAAAATCAAAAGCTTGCATTTACTCTTACAAAATCTTATACTTATAATTATTGGGCTGATCAATGATCGAGTGAAAACTGATTATTTTAATTGA 180 0.3222 MLVFYFFIPSLTLLKRRCRELSINRWPHRKIKSLHLLLQNLILIIIGLINDRVKTDYFN* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1411 59 ProSiteProfiles RWP-RK domain profile. 1 55 IPR003035 -
Amo07g1411 59 Pfam RWP-RK domain 10 34 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1411 Amo-Chr7 38228301 38228480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1411 5 41 AtRKD Transcription Factor Family AT1G74480 53.191 8.72e-12 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Amo07g1411 RWP-RK 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1411 - - aip:110264064 62.3882