Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1389 GACCGCAGCGAGAATGAGATTAAGCTAATCCTTGATAACATAAGAAAACAGGGCGATCTTCTCTCTGCTGGTGACAGGTTGCTTGTGTTCTGTGTATTGCATAGGGTGCTTAACCCCATGGGGTACCAGACCATAGCATGCCCCGAGTCTATGTTTGGTACGAACTTTCGAGCAATGGAGGAACAAGTTAAAAAGAAAGCCGATGCATATGCAATTGAGCTTTTATCAAGTCATGAAGAATTTAAAAGTGTAGGGGTTAGCGTTGAAGTTAAAGTCACTGCAGGTTTTCCTCTTAGACAGGTTATTTTACAGGAGGTTACAAGATACAATGTATCATGGATTATACTTGATAGGCACCTTCGGCGCGACATGAGATTCTACCTGAACAGGATACCGTTCAGGGTTGGATTGGTTAAAGATGACTTCTCTGTGGATATCTGGAGATCCCATCATGCAAACATTACAACAATCACGGAAACAAAGCCTGTCTATTCCTTTTACAAGTTTGTCTCTTTAGCAGATTGCCAAAGTATTGAAGACATTGAACAACAATCTATTATCTCTTTCAAAAGTTATCCCCATATGTTAACTTCTTCGGGTACCTCTGTCATGATTAAGAGCTATACAAAGCATTCAAATGCTGATGTATGGGAGCAGAGTTCTTCACTAGAATCTGGACCTTCTAAGCATGAAAGATCAGGCGTAAGCATGAAAGGAGAACATAAGCATACCGATAACTCTCATGTTGGCCAAAAGCAAGGAGGCTCTACACCACCACTTCTTTGTTCTGGATGCAAGATAAGGACCGAATTGTCTGTCAATGAGTTGACGAGGTTTACCTATTCTGAAATACAGCAAGCAACAAATGATTTTTCAAAGGATAACCTAATAGGTGAAGGTGGATATGGTCATGTTTACAAGGGTGTTCTTAAAGATGGACAGCAAATTGCAGCAAAGGTAAGGAAAGAGGAAAGCTCACAAGGCTTTTCGGAGTTTCATTCCGAGGTCTATGTCTTAAGCTTCGCTCGCCACAAGAATATAGTTATGCTATTGGGTTTTTATTGCAAAGAAAACCGAAATATTCTTATATACGAGTATATCTGCAATAGGTCTCTTGGTTGGCATTTATTTGGTAAACAAAAGTGCTCCCCTTCTGGAGTGGCAACAAAGCTAGGTGACTTTGGCCTTGCCAAATGGAGGAACGGTGATGAGTATGCTGAAACCGGTGTAGTTTCTGAGCGAACAGATGTGTATGCATTTGGCATCGTTTTGTTACAACTGATTTCAGGACACAAGGTCTCCAATTTCCGCAATCCAGAACAACAATCTCTCAGACAATGGGCTATGCCAATCATTGAGTCGTTGGCTTTACACGAACTGATTGACACTCGTCTTGGGAACTCATATGACACGTATCAACTATACCTCATGGTCAAAACCGCATTCTTCTGCGTCCAAATAGAGCCTCATGACCGTCCTTCAATGGGAGAGGTTGTGCGTCTTCTTGAGGGAGAAAGTAAAAATTTCCACACAATAGGAGAGGAATTGTTGCCAAAATATAACAGCTAA 1569 0.4136 DRSENEIKLILDNIRKQGDLLSAGDRLLVFCVLHRVLNPMGYQTIACPESMFGTNFRAMEEQVKKKADAYAIELLSSHEEFKSVGVSVEVKVTAGFPLRQVILQEVTRYNVSWIILDRHLRRDMRFYLNRIPFRVGLVKDDFSVDIWRSHHANITTITETKPVYSFYKFVSLADCQSIEDIEQQSIISFKSYPHMLTSSGTSVMIKSYTKHSNADVWEQSSSLESGPSKHERSGVSMKGEHKHTDNSHVGQKQGGSTPPLLCSGCKIRTELSVNELTRFTYSEIQQATNDFSKDNLIGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGFYCKENRNILIYEYICNRSLGWHLFGKQKCSPSGVATKLGDFGLAKWRNGDEYAETGVVSERTDVYAFGIVLLQLISGHKVSNFRNPEQQSLRQWAMPIIESLALHELIDTRLGNSYDTYQLYLMVKTAFFCVQIEPHDRPSMGEVVRLLEGESKNFHTIGEELLPKYNS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1389 522 PANTHER OS01G0253100 PROTEIN 8 381 IPR045271 GO:0004714|GO:0006468
Amo07g1389 522 Gene3D Transferase(Phosphotransferase) domain 1 363 515 - -
Amo07g1389 522 MobiDBLite consensus disorder prediction 231 248 - -
Amo07g1389 522 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Amo07g1389 522 PANTHER RECEPTOR-LIKE KINASE 8 381 - -
Amo07g1389 522 PANTHER RECEPTOR-LIKE KINASE 391 514 - -
Amo07g1389 522 PANTHER OS01G0253100 PROTEIN 391 514 IPR045271 GO:0004714|GO:0006468
Amo07g1389 522 SUPERFAMILY Protein kinase-like (PK-like) 275 501 IPR011009 -
Amo07g1389 522 MobiDBLite consensus disorder prediction 218 256 - -
Amo07g1389 522 ProSiteProfiles Protein kinase domain profile. 291 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1389 522 CDD USP_Like 20 128 - -
Amo07g1389 522 Pfam Protein kinase domain 292 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1389 522 Gene3D Phosphorylase Kinase; domain 1 263 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1389 Amo-Chr7 37630713 37638052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1389 240 505 Trihelix Transcription Factor Family AT1G70460 32.317 1.19e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Amo07g1389 Pkinase 5.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1389 - - vun:114163670 672.159