Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1372 ATGAAGCTTCTGAACGACGAAGCTAAGGAGATTAATGGTGCCATTTTGTCACTTTTGGCTTCGGTTTCGATGTCTCACGCTGCCTCCATAAATTTCATGGCGGAAAAGTGCCTGAGAGTGCTAACAGTGGTGGCGACGTGCGCTGATGGTAAGACAACGATGAACAAAGATATTTTGTGTGCTGCGGTAGTGGTGAAGGGACTGGCGAAGGCAGGGAAAGCAGCAAACGAAGATGCGATGGCGGTGCTTTGGATACTATATTGCCTTTGCAGCAACGAAAAGATGAGGGATAAGCAGAACCAAAACAGTGGCACAGTAATGCAAGGATCACTTGAGGAGGTGTGCCTGGATTTGATTATGGTTATTGAAAAAATTTTACCGCACACTATGCAATGTAACTATTGA 405 0.4543 MKLLNDEAKEINGAILSLLASVSMSHAASINFMAEKCLRVLTVVATCADGKTTMNKDILCAAVVVKGLAKAGKAANEDAMAVLWILYCLCSNEKMRDKQNQNSGTVMQGSLEEVCLDLIMVIEKILPHTMQCNY* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1372 134 PANTHER WDSAM1 PROTEIN 21 125 IPR045185 GO:0061630
Amo07g1372 134 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 21 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1372 Amo-Chr7 36617440 36623659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1372 11 97 U-box Gene Family AT5G09800 31.034 2.00e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1372 - K01062 adu:107491069 125.176