Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1342 ATGTGGAGATTTAACCCATTTACACACAAGGAGGCAGCTGGCCTTGAAGGCCGAGTTATAGATGTCGGCAATCTTAAGATAAATGTCCAGAAGGCCATCGCAGAAGGAGGMTTCTCTTGTGTTTACTTAGCACGTGATGCTTTCCATATGTCAAAGCAATATGCGTTGAAGCACATCATATGCAATGATGATGAATCACTTGCATTGGCAAAGAAGGAGATATCTGTGATGAAGTCACTGGTAGGACATCCCAATGTAGTCACACTTCATGCTCATACAATATTTGATATGGGTAGGACAAAAGAGGCATTTCTTGTAATGGAATATTGCGAGAAGTCTCTTGTTAGTGTGCTGGAAAGCCGAGGAGCAGGTTATTTTGATGAGAACCAGGTTCTCTTAATCTTCAGGGATGTATGTAATGCAGTTTTRGCTATGCACTGCCAGTTCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCAGATGGTTTATGGAAGTTGTGTGACTTTGGAAGCACTTCCACCAATCACAAGCGTTTTGAGAAGCCAGAAGAAATGGGAATCGAGGAAGACAATATCAGGAAGTACACAACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTTAGAGAAGTCATCAACGAGAAAGTGGACATATGGGCACTAGGGTGTCTCCTTTTTCGCATATGCTATTTCAAAAGTGCTTTTGACGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCTAGATACAGTTCATCAGTCTGGTTTCGTGTTAATGAGCAGCTACCTATTACTTTACAGAAGTCATTGCCTGACAGGCCACCTGAGTTGCCTGCTTCCAACCATCCGGAAGGTTCTTCAATGTCCACTAARAAATCACACCCAGCACCTAGCAGGAATCCACCTCCCCCGCCTTCATCTGTAGAATCCAAACCAWCGGTCCAGGCATCTGTTGCTTCTAGGGGTGGTGGAAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAATGATTCAATCGTTTCCAAGGAAAAGAGTAAACCTGTATTTGATGAAGAACCATCTAGTAACAATAACACATTAAAGSATGATAGAGTTCATCRAGAGAATGATCASTTACCCAAAAATGTTGGTACTAACAAAGTGGRCAACGCACCAACTCATTCAGTAAAAAGCAGTGTACATGGAAAGTCACACAAGCCTGACACTGCATCATCCAAGGATTTCGAATTGAACTTTTTTAAGGATAAAGGTCAGATGAATGAGAGGGGATTGTCAAATATAGACAATACAGCTACMTTTCAGGATCATGCTTTTAACACWTTTGTTGCAGAATTTGATACTGCTAAGCTCAGTCCTGGACTTAAGTCTGAAAGGGAAGAAARATTAGAAGCTGAGGTGGAGAAACTGAAAGGGCAGTTGAAGGAAGCAAACATAGCCAAAGCTGAAATCACTTCAAAGTATGAAAAGCTTTCTGCTATATGCAGATCGCAAAGGCAAGAATTACAGGATCTAAAACAGGCACTTGCWGCAAAAACTCCCTCYCCAAATAGGGAGGGTATGAGGACCTCTCCTGCACTTACATCATCTGCATCCACGGCTTTTCCTGAYGAACCACGACAACAAACCTCCTTTTCAGCTGACAATACTTCAAAATCTGTCAGGACTAGAAARACCCAGCAGAAGCCGCAGCCTGCTCCAGTTGCTGCTAACTTCGATTCMTGGGGTTTTGGATCTGATAACTTCAGTGCTGTAAGAGCTAGTACCCCACAGATGCCAAGACCTGGTGAAGGGAGTAATTCTCAGGCATTTGGTGAAGCAAAGGCATTTGAGAAGAAATCAACTACCCCCCCTGCTGGATGGGCTGGATTTTAA 1923 0.4327 MWRFNPFTHKEAAGLEGRVIDVGNLKINVQKAIAEGGFSCVYLARDAFHMSKQYALKHIICNDDESLALAKKEISVMKSLVGHPNVVTLHAHTIFDMGRTKEAFLVMEYCEKSLVSVLESRGAGYFDENQVLLIFRDVCNAVLAMHCQFPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPRYSSSVWFRVNEQLPITLQKSLPDRPPELPASNHPEGSSMSTKKSHPAPSRNPPPPPSSVESKPXVQASVASRGGGNGGQLGAFWSTQHANDSIVSKEKSKPVFDEEPSSNNNTLKXDRVHXENDXLPKNVGTNKVXNAPTHSVKSSVHGKSHKPDTASSKDFELNFFKDKGQMNERGLSNIDNTATFQDHAFNTFVAEFDTAKLSPGLKSEREEXLEAEVEKLKGQLKEANIAKAEITSKYEKLSAICRSQRQELQDLKQALAAKTPSPNREGMRTSPALTSSASTAFPDEPRQQTSFSADNTSKSVRTRKTQQKPQPAPVAANFDSWGFGSDNFSAVRASTPQMPRPGEGSNSQAFGEAKAFEKKSTTPPAGWAGF* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1342 640 MobiDBLite consensus disorder prediction 280 421 - -
Amo07g1342 640 Gene3D Transferase(Phosphotransferase) domain 1 10 298 - -
Amo07g1342 640 PANTHER SERINE/THREONINE PROTEIN KINASE 267 540 - -
Amo07g1342 640 PANTHER SERINE/THREONINE PROTEIN KINASE 1 268 - -
Amo07g1342 640 Coils Coil 479 524 - -
Amo07g1342 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Amo07g1342 640 Pfam Protein kinase domain 29 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1342 640 MobiDBLite consensus disorder prediction 592 614 - -
Amo07g1342 640 MobiDBLite consensus disorder prediction 521 640 - -
Amo07g1342 640 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 267 540 - -
Amo07g1342 640 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 268 - -
Amo07g1342 640 Coils Coil 476 477 - -
Amo07g1342 640 MobiDBLite consensus disorder prediction 533 583 - -
Amo07g1342 640 SUPERFAMILY Protein kinase-like (PK-like) 29 326 IPR011009 -
Amo07g1342 640 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1342 640 SMART serkin_6 27 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1342 Amo-Chr7 35044136 35047078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1342 26 292 CBL-interacting serine-threonine protein kinases AT5G45810 29.893 1.44e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Amo07g1342 Pkinase 4.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1342 K08853 - gmx:100808507 938.332