Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1320 ATGAACACAAAACCCTCCAAATCAAAAGTTGATAAAGCCAATGCCCTCAATACAATTCAATGGGCTCTTGAGTTGTCCCTTCTTTTTCTTTTTCTTTTTCTGGATCATTCATCAATGGGACCAATAATGGTGGCTGAAGCTAGAACTTGTGCGTCTCAAAGCCATCGCTTCAAAGGAGTGTGTTTGAGCGACACAAATTGCGCCTCCGTTTGCAAAACGGAGGGCTTCCCTTCCGGGGATTGCCACGGCTTTCGCCGCCGATGCTTCTGCACGAAGCATTATAGAAAAATTCGAAGCCAGGATTCTTAA 309 0.4498 MNTKPSKSKVDKANALNTIQWALELSLLFLFLFLDHSSMGPIMVAEARTCASQSHRFKGVCLSDTNCASVCKTEGFPSGDCHGFRRRCFCTKHYRKIRSQDS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1320 102 Pfam Gamma-thionin family 48 92 - -
Amo07g1320 102 PANTHER DEFENSIN-LIKE PROTEIN 1 25 93 - -
Amo07g1320 102 ProSitePatterns Gamma-thionins family signature. 48 71 IPR008176 GO:0006952
Amo07g1320 102 PRINTS Purothionin signature 49 64 IPR008176 GO:0006952
Amo07g1320 102 PRINTS Purothionin signature 79 93 IPR008176 GO:0006952
Amo07g1320 102 Gene3D - 48 93 IPR036574 -
Amo07g1320 102 SMART gth_4 49 94 IPR003614 GO:0006952
Amo07g1320 102 CDD Knot1 59 91 IPR003614 GO:0006952
Amo07g1320 102 PANTHER DEFENSIN-LIKE PROTEIN 2-RELATED 25 93 - -
Amo07g1320 102 SUPERFAMILY Scorpion toxin-like 48 93 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1320 19 93 Plant Defensins Gene Families AT2G02120 58.442 8.94e-29 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1320 - - gmx:100798577 106.686