Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1305 ATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATAATCAGTATGAGAAGGAGGAAGAAAAACATGAGAAAGTTGACGTGGATTATATGGATGAGAACGACACAAATGTGAAACCAATGTTCGATTATGTGGGCTTCGATGAAGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGAAAGAACAGGACTAGGAAGACTCGTGTGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCAAAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACACCCAAGATAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATTGTGACATGGATGGCCACAATCGAACAACTTGTCGTGTTCGTCATGGCATTTCACAGTTAGAAGGCCATGGAAATGACACATTTATTAATGACTCGGATGATCACATGAACATTGAAGATGACTCATTGGCTCTGTATGAAGCTCTAATGAGTCTAGAAGAACTGCTAGCTTACATTAACAGCCAAGAAGAAGCTAGGCTAAGGAAGAAGAAGTTCTACTGGTGA 648 0.4028 MGQEFSHEGVNSEHTSYNQYEKEEEKHEKVDVDYMDENDTNVKPMFDYVGFDEGDEDVCHFHFSDVNIAFEFYNRYARTRGFSARKNRTRKTRVGVLKLKNFVCHREGFRPQNNYGIGNLKRKPTPKIRCGCSAMMEIRVDCDMDGHNRTTCRVRHGISQLEGHGNDTFINDSDDHMNIEDDSLALYEALMSLEELLAYINSQEEARLRKKKFYW* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1305 215 MobiDBLite consensus disorder prediction 1 16 - -
Amo07g1305 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 145 - -
Amo07g1305 215 Pfam FAR1 DNA-binding domain 71 141 IPR004330 -
Amo07g1305 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 10 145 - -
Amo07g1305 215 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1305 Amo-Chr7 33887937 33892938 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1305 FAR1 1.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1305 - - ahf:112723376 259.996