Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1304 ATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATAATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATGTGGGCTTTGATGCAGGGTATAATATTGACTCACTCGAAGACATTAGGATTATTGAATTTTGGAACATCAGGGATGAAAATGTATGTCATTTTCACTTTTCTAATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGTCTTTAGTGCTCGGAAGAACAGGACTACGAAGAGTCGTGCAGGCATACTTAAGTTGAAGAATTTTGTATGTCATCATGAAGGATTTAGACCGCAAAATAATTACAGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTTGTGTAGATGCACCTAGTGGTCGTTGGTACAATCTGGTTGAGTTCATTCAACACTTTAATTGTTGTATCGACCATATAAGGTGGAAAGAGAGGAGTGCTGCCAATGTTAACACCTTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGTTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTATCGATTTGGACCGAATGTCAAATGAGATGTGGTGTGTATTCTGTTGTGACAATGAGATGGAATTCAATTGTTCATTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTCTTGCCTCAGTGGACCAAGACTGCCAAAGTAGGTTTGCAAAATGCGGACGGGCTTCATTGGGATTCTTTGATGCTAAGTCAATACGGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATACTGCACAAAAGAATTGGTCAATGATGCAGATATTAAAACATCGATGTGGACAGTGTGGCATGGAGGGCCACAATCGAACAACTTGTCGTGTTCGTCGTGGAATTTCACAGTTAGAAGGCCGTGGAAATGACACATTTGATAATGACTCCGATGATCACATGAACATTGAAGATGACTCATTGGTATATGATGAGAGTGCTTCGTACAGTAGCAATGAAGTGCTCCTATATTATGCTAGATTCTTTGCTGTGGAGCATACTAGTGCCGGATTATTCTCAAGGAAGTGTGGTGAATATTTATTTGTGGCTCTGTATAAAGCTCTAATGAGGCAAGAAGAACTGCTAGCTTACATTGACAGCCAAGAAGAAGCTAGGCTAAGGGTGAGTTGTCTAAAATCTTTTTAG 1410 0.3979 MGQEFSHEGVNSEHTSYNQYEQEEEKHEEVDVDYMDEDDTNVEPMFDYVGFDAGYNIDSLEDIRIIEFWNIRDENVCHFHFSNVDIAFEFYNRYARTRVFSARKNRTTKSRAGILKLKNFVCHHEGFRPQNNYSIGNLKRKPTPETRCGCSAMMEICVDAPSGRWYNLVEFIQHFNCCIDHIRWKERSAANVNTLSIFHMFQPILVRVASMKVINMRQTGSYVIYSIDLDRMSNEMWCVFCCDNEMEFNCSFCVLVHEDIEELPRSLVLPQWTKTAKVGLQNADGLHWDSLMLSQYGCLMDWFRQLANFACRDNERFIFTREMAMNLLKQFKEEDTAQKNWSMMQILKHRCGQCGMEGHNRTTCRVRRGISQLEGRGNDTFDNDSDDHMNIEDDSLVYDESASYSSNEVLLYYARFFAVEHTSAGLFSRKCGEYLFVALYKALMRQEELLAYIDSQEEARLRVSCLKSF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1304 469 MobiDBLite consensus disorder prediction 1 30 - -
Amo07g1304 469 MobiDBLite consensus disorder prediction 1 17 - -
Amo07g1304 469 Pfam FAR1 DNA-binding domain 89 176 IPR004330 -
Amo07g1304 469 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 167 - -
Amo07g1304 469 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1304 Amo-Chr7 33776917 33782810 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1304 FAR1 1.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1304 - K17604 aip:110272016 444.121