Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1295 ATGGTTAAACCATCATCTTTCTCATATCATATGGAAAACCATCAAAACAATAACCCGACCCGTGACCCAGACCTAGCAGAAGAAGAGAAGAAGAAGCGAAACCAACACCCTCAGGTTTGGGGCACGTGGGAGGAACTCTTGCTAGCGAGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGACACCGTCGCCATGGAGGTACAGTCGCGGACCTCCGTACCCAACCTACAAGCCACCGCGCTCCACTGCGAGCAGAAATTCCACGATCTCAACCTCCGATTCGCCGACCAATTAAACGACGCCGTCCCGCCGCTTCTCCAGAACGGCGCGGCCTCCGTCGATAGCTCTGATCATGTCCCCTGGCTCGACGAATTGCGAAAGCTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACAATCCGACGTTTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGAGAAAGAAAATGACGGTAAAGTCGATGAGAAAGCAGATCTGGCGGTTTGCGGCGAGGCACGGCCGGGAAACGATGGAACCGGCGGAGAAAGGGAAGTTCCGGAGCCGACCGGTTCTGAACCGGAGATTCGCCGGCTCGACGAGAGCACCACGAACACTGATAAGCTTTTGCCAACCACCGGTGACGAGTCGGACCGGGAAAATCAGTCGGTTAATGAGTCGAACTCGACCGGTTCGCGGTTTGAGGGAGGGAAAACCGGGGCAGGAGATGGTGATGGGAAGACGGGGGTAGGGGCGGTTCCGGTTCATCCCGGTCCGAAAGAACCGGATCCGGTTGGCAGGAAGCGGAGACCGATTGGGGAGGAATCGAATAACGGAAGCTACGATACTGAGGTTAAAGTTCCAACGTGCGAGTCGCAGCCGCCAAGTGAGGAGAGGAAGGCAGAGGATGGTGGCTCGTCCGAGTTGCGTGATGACTCGGTGGGCCACTCGGGGGAAGGGGGACGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCTGCTAGCCTGACGAGGAAGAGGAAGACGCGGCGGAGGAAGGAGGCTTCCGGTGGTAGTGGTGGCGGCGAGGTGGCCCTGGAGAGTGACGAGACCATGGTGAAATCCGAGCCGTTGATTGGGCTGTTGGAGATGATCAAGGCACACGAACACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGCAGGAATCGGAAAGATACAAAAACATTGTAAGACAGCACGTGGATTTGGAAACCATACAATCGAGACTCCATAAAGGACATTATTCCTCTAGCACCAACTCTTTCTTTCGTGACCTTCTCCTCCTCTTTACGAATGCCACCGTCTTCTTTACCAGAGACTCCCTGGAATCAATGGCGGCGCAGCAGCTGCGGCGCCTCGTCATGGCAGAGATGAAAAACCAAGGCCAAGCACAATCTGATCCCACCCCACAGAAGACGGATTCCAACCCTCCAAACGCTCCTCAAGCCAAACCAGAATCTCTCCTTTCCAAGCACAAAGCCTCTGCTCCAATATTGGTATGCCGAAAACGCAGTTCAATGTCATCTAAACCTTCTCCGGCGACCTTTGGCCAAAAGGGTGACCAACCCATCACCGATAAGAAGGAAAAACCATCTTCTGATGCAAAACCACCCATGAAACCCTCTTCTTCCGAGACAGATGAAGATGAGCCTCCCAAGGCCAAGGAAAAGCCGGTCACCGGAGCTCGAAGCCTGAGAAGAAGCAACAAGAACCTCAGCAGCAACAGCAATTCTGGCAATAAGAAACTCCCCACTAACTCCACCATAAAAGCAGCGACTTTGGTGACCAAGGCTGTCGAAGCCGCAAAACCAGACAAGAGCAAAGCAGAGGGAGGGCAGGACAAGAAGAAGAATGCCGCTGCTGATTTCTTGAAACGAATAAAGCGAAACGCTCCAGTGGAGGCACTGAAGAGTGGCAGTGGTAGTGGTGGAGGAAGTAGTAGCAGCAGCAGAGGTGGGACTGCAAGTATGAAAGAGCAAAAGAAAATTGTGAATAGTGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCGTCAAGGCATAATAACGGTGGAGGAGGAGGGTCAGGGGATAAAAGGAACAAGAACGTTGTTGAGAATAGCAAGAGGAGTGTAGGTAGGCCTCCAAAGAAAACAGCAGAAAGCAATACAGCTTCTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCTAGTAAGGATAAGCGACCCAAGAAACGTTCTAAGAAATGA 2262 0.5354 MVKPSSFSYHMENHQNNNPTRDPDLAEEEKKKRNQHPQVWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTSVPNLQATALHCEQKFHDLNLRFADQLNDAVPPLLQNGAASVDSSDHVPWLDELRKLRVAELRREVQQSDVSILSLQLKVKKLEEEREKENDGKVDEKADLAVCGEARPGNDGTGGEREVPEPTGSEPEIRRLDESTTNTDKLLPTTGDESDRENQSVNESNSTGSRFEGGKTGAGDGDGKTGVGAVPVHPGPKEPDPVGRKRRPIGEESNNGSYDTEVKVPTCESQPPSEERKAEDGGSSELRDDSVGHSGEGGRGTRESSEVQSSASLTRKRKTRRRKEASGGSGGGEVALESDETMVKSEPLIGLLEMIKAHEHSSLFERRLESQQESERYKNIVRQHVDLETIQSRLHKGHYSSSTNSFFRDLLLLFTNATVFFTRDSLESMAAQQLRRLVMAEMKNQGQAQSDPTPQKTDSNPPNAPQAKPESLLSKHKASAPILVCRKRSSMSSKPSPATFGQKGDQPITDKKEKPSSDAKPPMKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLSSNSNSGNKKLPTNSTIKAATLVTKAVEAAKPDKSKAEGGQDKKKNAAADFLKRIKRNAPVEALKSGSGSGGGSSSSSRGGTASMKEQKKIVNSGKGDNKGKERASRHNNGGGGGSGDKRNKNVVENSKRSVGRPPKKTAESNTASAKRGRENSASASKDKRPKKRSKK* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1295 753 MobiDBLite consensus disorder prediction 193 209 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 613 753 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 266 280 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 675 691 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 471 495 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 721 736 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 21 36 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 534 575 - -
Amo07g1295 753 ProSiteProfiles Bromodomain profile. 384 456 IPR001487 GO:0005515
Amo07g1295 753 MobiDBLite consensus disorder prediction 298 328 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 613 644 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 517 531 - -
Amo07g1295 753 SMART bromo_6 369 475 IPR001487 GO:0005515
Amo07g1295 753 MobiDBLite consensus disorder prediction 1 36 - -
Amo07g1295 753 Pfam Bromodomain 379 459 IPR001487 GO:0005515
Amo07g1295 753 CDD Bromodomain 379 470 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 576 601 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 470 601 - -
Amo07g1295 753 PANTHER BNAC04G22430D PROTEIN 22 753 - -
Amo07g1295 753 SUPERFAMILY Bromodomain 374 473 IPR036427 GO:0005515
Amo07g1295 753 MobiDBLite consensus disorder prediction 155 367 - -
Amo07g1295 753 Pfam Myb-like DNA-binding domain 38 72 IPR001005 -
Amo07g1295 753 MobiDBLite consensus disorder prediction 1 20 - -
Amo07g1295 753 CDD SANT 40 73 IPR001005 -
Amo07g1295 753 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 22 753 - -
Amo07g1295 753 Coils Coil 137 171 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 652 673 - -
Amo07g1295 753 Gene3D - 363 480 IPR036427 GO:0005515
Amo07g1295 753 MobiDBLite consensus disorder prediction 155 174 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 706 720 - -
Amo07g1295 753 MobiDBLite consensus disorder prediction 281 295 - -
Amo07g1295 753 SUPERFAMILY Homeodomain-like 33 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1295 Amo-Chr7 33561492 33566669 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo07g1295 Bromodomain 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1295 - - adu:107458545 1306.2