Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1258 ATGCCTATCCCTGTATCGTCCGCGTCTGCTGCTCGCCTATCGGACCTTGAGTGGTCTGCATGGTGGTTCCTGCACGCAGTCCCCGAGTGTCGTCGCAGTTATTGGGTTCTCGTGTTTCGGCTTTCTTGTCGCCGCTGGCAGAAGGAAGTCGCGGAAAATCCTGATTGCTTGCGTTTGGAGGGGAGGTCGCGGCGTCGCCGTCGCCCGCATGCTTTAAGAATTTGGCACTGTGTGGTGAATATTTTGATGGACGTTCCCGAGGCTGTTGACATTAATGCAATGTGTGAGGAGGGGGCAGGCGTGATGGGCGCAGTCGATTTTGGAGATGTAGCCGATATAACAGAAAATGATATTTTGAGGAAGGTGTTTCGTAGCGAAGACGATGCATACGAGTTTTATAAGAGATTAGGAAAATTCTACGGGTTTGGTATAAGAAGGGGAGACATGTTCAAGGATGAGAAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGATCGACAGGAAGAGGCCTCACAAGCCGGAGACAAGGATGAATTGTGAAGCAAGAATGTGTATATATTTAGATAAGGACAGCTCGTTGTGGAGGGTCAAGAAAATCATTTTGAACCACAATCACGACATGACTCATCCTGGAATG 675 0.477 MPIPVSSASAARLSDLEWSAWWFLHAVPECRRSYWVLVFRLSCRRWQKEVAENPDCLRLEGRSRRRRRPHALRIWHCVVNILMDVPEAVDINAMCEEGAGVMGAVDFGDVADITENDILRKVFRSEDDAYEFYKRLGKFYGFGIRRGDMFKDEKGNLVRRRFFCNREGQRDKKHYNRIDRKRPHKPETRMNCEARMCIYLDKDSSLWRVKKIILNHNHDMTHPGM 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1258 225 Pfam FAR1 DNA-binding domain 131 220 IPR004330 -
Amo07g1258 225 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 116 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1258 Amo-Chr7 32072711 32075031 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1258 FAR1 4.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1258 - - adu:107469631 303.138