Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1200 GTATTCACATTCGTTCTTCGCAAATCCGGCACCGAGTGGACTGCGAAGCAGCACTCCGGATACATCGAGAACTCCGCCTCCTCCACCTATGACCTTCAACGCAAGCTTGTCAATGCCGTTCGTGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGGTACTGTTGCTGCTGCTCATGCTGGTGGTGCTGTCGCAGAGAGTGCTGCCCCTGGTGCCGAGAAGAAAGAAGAGAAGGTCGCGGAAGAAGAAGATGAAGATTTTGGAATCTCACAAAAAGAGGTGACAACTGATACTAGACCGAGGGAGGGGACGGCGTGGCTGATGAGGAAGATGGCACGACATTGCGAGGAAAAAGATTGCGTTGGGGTTTCTTTCCAACTGTAA 453 0.5342 VFTFVLRKSGTEWTAKQHSGYIENSASSTYDLQRKLVNAVRAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGGTVAAAHAGGAVAESAAPGAEKKEEKVAEEEDEDFGISQKEVTTDTRPREGTAWLMRKMARHCEEKDCVGVSFQL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1200 150 MobiDBLite consensus disorder prediction 87 124 - -
Amo07g1200 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 113 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1200 Amo-Chr7 27028270 27029375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1200 1 67 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 68.657 8.05e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1200 K02942 - gmx:100527385 84.7297