Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1182 ATGGAACCCAGCCCTGGTCGTGGTGCTGCTCGCCTCTCTCTGTGTCGCGGTTCTGCTCAGCCTCATCTTCTCGAACCCAGCCATGGTCGTGGTGCTGCTCGCCTCTCTCTGTGTGAGTACGAGAAGGTTGAGAAGATTAGGGAAGGAACCTACGGCGTCGTTTGCAAGGCTGGCGACCACGTTACCAATGAGACCATCGCTCTCAAGAAGATTTTCCTTGAGCAGGAGGATGAAGGCGTTCCTAGCACTGCATTTCGCGAGATTTCTCTCCTCAAGGAAATGCAGCACAGGAATACTGTCCATCCTTATGTTGCCACTGGAAATAAGAACTCTAAATTTGGCATTAGAAATGAGAAGCTGCAGTGGTTTTTAGATGCTATAAAGGAGCATTCTAATGAGGTTAAGCTTGTAGGTGTCCACTGCCATCTTGGGTCAACAATTACCAAGGTAGACATCTTTAGGGATGCTGCTGTTATTATGATCAACTACATTGACCAAATCCGAGATCAAGGTTTTGAAGGCAGTGATAAAAATAATGGAGCTCATAATGGATGA 555 0.4703 MEPSPGRGAARLSLCRGSAQPHLLEPSHGRGAARLSLCEYEKVEKIREGTYGVVCKAGDHVTNETIALKKIFLEQEDEGVPSTAFREISLLKEMQHRNTVHPYVATGNKNSKFGIRNEKLQWFLDAIKEHSNEVKLVGVHCHLGSTITKVDIFRDAAVIMINYIDQIRDQGFEGSDKNNGAHNG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1182 184 Pfam Protein kinase domain 40 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1182 184 PANTHER DIAMINOPIMELATE DECARBOXYLASE 93 172 - -
Amo07g1182 184 SUPERFAMILY Protein kinase-like (PK-like) 38 106 IPR011009 -
Amo07g1182 184 Gene3D Phosphorylase Kinase; domain 1 31 127 - -
Amo07g1182 184 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 92 173 IPR022644 GO:0003824
Amo07g1182 184 PANTHER DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED 93 172 - -
Amo07g1182 184 SUPERFAMILY PLP-binding barrel 98 177 IPR029066 -
Amo07g1182 184 ProSiteProfiles Protein kinase domain profile. 40 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1182 Amo-Chr7 26322676 26326083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1182 39 100 Core Cell Cycle Gene Families AT3G48750 85.484 2.22e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Amo07g1182 Orn_Arg_deC_N 6.9e-13 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1182 K01586 - adu:107472072 178.333