Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1180 ATGGAGGGCAGGAATGGTTTGTTTGGTGGTTGCGAGGAATTTGGGAATGCAATTGGATCAATTTGCAAAAATGATAGCGCAGAGAATGGTTGTGACAGTGAAGCTCGTCAGCCCAGTTTGGATGATGATGCATCAGATTATGGAGACGTCATCGGTCTCACAGCAGAAGATATATGTAAGAAGGTCTTTCGGAGTGAGGAACGTGCTTATGATTTCTTCGCAAAACTTGGAAAATTTGTTGGGTTTGGGGTCCGAAAGGGTGACTACGGGAAAGATGAGGAGGGGAATTTGATAAGGCGGAGATTCTTTTGCAACAAGGCCGGTTTAAGGGACCAGAAGCATTACAACCGGGTGGATAGAAAAAGATCACATCGTCCAGAAACGCGCACGAATTGCAAGGCAATGCTGTCAGTGTATCTTGATAGGGTTTCTTGCACTTGGAAGGTTAGGAAGGTGAACCTGGAACATAATCATCCACTGACGCCCAGGATAATGGTACACATGATTCCAGGATTTCGCCGTATGTCAGATTCTGCCAAGGCACACATAGATGGGATGCAGAGGTACGGCTTACCAACCTCAAAGATACTGGGGTACATGGCAGGAATTTCTGGGGGGTATTCTCTCCTTGGATTCACCAAAAAGGATGCTTACAATTACATCGAGAAGTGCAAACGCGACAAGATTACGGATGGTGACACTAATGCGGCCGTCATATACCTTGAGGGAAAGGCCACAGCGGATCCGATGTCGATGGCAAGGTACAACGTCACCGATGATGGTATGTTGGCGAACCTCTTCTGGGCTGATGGAGCAAGTCGAGTTGATTACCAATATTTTGGTGATGTCCTTGCTTTCGACTCCACCTACAAGAAAAACAAATATAAGAGGCCATTGGTCATATTCTCTGGCACGAATAACCATAAACAAACAACAATCTTTGGCTTTGGTCTTGTTTTGGATGAGCGCATACCTTCTTACACATGGATGCTCGAGAGCCTGGTTGAAGTAATGTGTGGCAAGACACCGTCCGTAGTTGTTACAGATGGAGATGATGCAATGATTGCAGCTGTGCAGAAAGTTTTTCCACGAGCAACTCATAGGCTGTGTGCGTGGCACCTACAAAGAAATGTAACCCCGAACTCAAACGAGGAAATGTTTCGGAATGTGTTTGCAAAGTGGTTATATGCTGACATGGAAATTGCTGACTTTGAGGCTGAGTGGGCTCAGGCAGTGATAGACTTTGAATTGAGTGACAAGTTATGGGCTTCCCAGATGTACGAGAAGCGAGAGATGTGGGCCAACGCATATCTGCGGAACAAGTTTTGTGATGGCTTTCGGACGACATCTAGGTGCGAGGGAATCAACGCTAATGTAAAAAAATTCCTCACTTCTAGGCATAGCATTCTAGAACTTGTTCAGAATCTCGAGTTGCTTGTTCGGGAGTACTGA 1452 0.458 MEGRNGLFGGCEEFGNAIGSICKNDSAENGCDSEARQPSLDDDASDYGDVIGLTAEDICKKVFRSEERAYDFFAKLGKFVGFGVRKGDYGKDEEGNLIRRRFFCNKAGLRDQKHYNRVDRKRSHRPETRTNCKAMLSVYLDRVSCTWKVRKVNLEHNHPLTPRIMVHMIPGFRRMSDSAKAHIDGMQRYGLPTSKILGYMAGISGGYSLLGFTKKDAYNYIEKCKRDKITDGDTNAAVIYLEGKATADPMSMARYNVTDDGMLANLFWADGASRVDYQYFGDVLAFDSTYKKNKYKRPLVIFSGTNNHKQTTIFGFGLVLDERIPSYTWMLESLVEVMCGKTPSVVVTDGDDAMIAAVQKVFPRATHRLCAWHLQRNVTPNSNEEMFRNVFAKWLYADMEIADFEAEWAQAVIDFELSDKLWASQMYEKREMWANAYLRNKFCDGFRTTSRCEGINANVKKFLTSRHSILELVQNLELLVREY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1180 483 Pfam MULE transposase domain 283 377 IPR018289 -
Amo07g1180 483 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 476 IPR031052 GO:0006355
Amo07g1180 483 PANTHER OS02G0262500 PROTEIN 57 476 - -
Amo07g1180 483 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1180 Amo-Chr7 26038478 26039929 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1180 MULE 4.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1180 - - ahf:112701370 873.233