Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1171 ATGAAAACTCATCATTGGAGCTGCTTCTTTATTATCTTATCATCAATAGAGTTTTGGACCATCCTCTTCTTCGCCTTTCCTTCCGCAAAAGCCCTCAAGGCATTTGAATTATGTAATAATGCTTCAAAATCTAACTCAAGAAGAATCCTACATCAGCCGCTTTTTCCGGCAGCATCAGCTCCGGCGTTACCTCCGCCTTCGCCGTCACTGGACACTCCTTCCCCTCCGGAAATTCCTTTCTTCAACGAGAATCCACCAGGTCCACCGCCGGCGGACCTGAACCAGCAGCCGGCTGCGGTGGACACCACCAACGGCCGAATTGCAAACCCGACYGCYACGCAGCCGGCGAAGCCGGTTAAGACAGTGGCGATTGTGGTATCTGTCGCGTTCGTTACGTTTGCAATGCTGTTTGTGCTGGCGTTCTTCTTGTATAAGCAAACGGCGAAGCAGCAGCCGGCGGAGACGACGCAGAAGCTGGTGGCCGTAGGGTCACGAAACGAGTTGCCACCACCGGCGGCGGCGGCGCCACCGTCTAGTTTGTACTACATTGGGACGGTGGATCCAAGCAGAGCGTCGGTGAGCGAACCGAGTGAAGAAGCCACTTCGAGTGAAATGAACCGTTCTTCATATCGAAAACTGAATTCSATGAAYGTTTCAGAAAGGTACCGTCCCAGCCCCGAGCTTCAGCCATTGCCGCCGCTAAGCAAAACCGTCGCCGACGGCAGCCATCCGCCACCGGCTGCCTCCTCGTCATCTTCGTCCGATGACGAAGTGGATAGCCGAGACACGGCGTTTCACTCGCCACAGGCCTCATCTCTCAGCCTCGATGACGGTTACCACACGCCGGTTTCGCGCCAMAGTTATCTCTCCAACGGTAGCYGTACTGCGGCGGCACCGCCAGTTCCTTTCTCGAAGAGAACTTCTCCGAAGTCTCGGATTTCAGCTTCGTCGGATACCAGAATCGCCATGATYCCACCAATTAAGCATGCTCCMCCACGGTCACCATCCCCGACACAGCAAGAATCTACCTCCGGTCCTTCCAGACGGCCGACATTCTCGGCACCTCCTCCAGCACCAAATTTAACTCATATTCATTCAAATATCCAAGTTGCAGCATCCGCTGCAAAGAGCATTGCAAAGGCTTCAGAGGAGTTTAACAAGATGAAGAGCGTGGCATCATCTGAGAAGTTGGACGGTGATGACGTGGAAGGAGGAAGACCCAAGCTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACATCTGAACGTGCCACTGTGTGGGACCAGTTAAAGTCAAGTTCGTTTCAATTAAATGAGGGCATGATGGAATCTCTCTTTGGCTGCGGTGCCACCAGTTCTACACCTAAAGAAACGGTTACAAGGAAATCAGTTATTCCGCCCGTTGAACAGGAGAACAGAGTGTTAGATCCCAAGAAGTCCCAAAACATTGCTATAATGCTCAGGGCACTCAATGTTACTAGAGATGAGGTCTCCGAAGCTCTCTTGGACGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAAAAGCTATGATGCTGGTGTTTCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTACTTGACATACCATTAGCCTTCAAAAGAGTGGAAGCCATGTTGTACAGAACGAATTTTGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACCCTCGAGACAGCGAGTGAGGAATTGAAGAACAGCCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGGAACAGAATGAATGTTGGAACCTACCGTGGCGATGCCAAGGCGTTCAAGCTAGACACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTTGTCCAAGAAATCATTAGAACGGAAGGTTCAAGTGGCGAATCGTCCAGCGAAAATGCACAGGCAGAAATGAATTCTCAATTTAATGATGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGAAACGTGAAAAATGCTGCAGGAATGGACTCAGAAGTCTTAAGTAGTTATGTCTCTAAGCTTGAATCGGGTCTTGATAAAGTGAGATTGGTTCTGCAGCATGAAAAGCCGGGTATGCAGGGGAATTTCTTCAACTCAATGAAGCTCTTCCTGAAAGTCGCCGAAGCGAAAATCGTTACGATTAAATCTGATGAGAGAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAGTACTTTCATGGGAATATGGCAAAGGAAGAAGCGCATCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGACCAGGTCTGCAAAGAAGTGGGGAAGATGCAGGACAAAACTGTGATTAACTCCGCGAGATCCTTCAGGATAGCGGCGAGCGCGTCGTTACCAGTTCTCAACAGGTACCATGCAAGGCAAGATACAACCAGTTCAGATGAAGAGAGCTCATCTCCCTAG 2550 0.4851 MKTHHWSCFFIILSSIEFWTILFFAFPSAKALKAFELCNNASKSNSRRILHQPLFPAASAPALPPPSPSLDTPSPPEIPFFNENPPGPPPADLNQQPAAVDTTNGRIANPTATQPAKPVKTVAIVVSVAFVTFAMLFVLAFFLYKQTAKQQPAETTQKLVAVGSRNELPPPAAAAPPSSLYYIGTVDPSRASVSEPSEEATSSEMNRSSYRKLNSMNVSERYRPSPELQPLPPLSKTVADGSHPPPAASSSSSSDDEVDSRDTAFHSPQASSLSLDDGYHTPVSRXSYLSNGSXTAAAPPVPFSKRTSPKSRISASSDTRIAMIPPIKHAPPRSPSPTQQESTSGPSRRPTFSAPPPAPNLTHIHSNIQVAASAAKSIAKASEEFNKMKSVASSEKLDGDDVEGGRPKLKALHWDKVRATSERATVWDQLKSSSFQLNEGMMESLFGCGATSSTPKETVTRKSVIPPVEQENRVLDPKKSQNIAIMLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYDAGVSKLGSAERFLKTVLDIPLAFKRVEAMLYRTNFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRTEGSSGESSSENAQAEMNSQFNDDEFRKKGLQVVAGLSRDLGNVKNAAGMDSEVLSSYVSKLESGLDKVRLVLQHEKPGMQGNFFNSMKLFLKVAEAKIVTIKSDERKALFLVKEVTEYFHGNMAKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDKTVINSARSFRIAASASLPVLNRYHARQDTTSSDEESSSP* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1171 849 MobiDBLite consensus disorder prediction 264 294 - -
Amo07g1171 849 MobiDBLite consensus disorder prediction 96 112 - -
Amo07g1171 849 MobiDBLite consensus disorder prediction 189 367 - -
Amo07g1171 849 ProSiteProfiles Formin homology-2 (FH2) domain profile. 399 823 IPR015425 -
Amo07g1171 849 Gene3D Formin, FH2 domain 401 809 IPR042201 -
Amo07g1171 849 MobiDBLite consensus disorder prediction 58 93 - -
Amo07g1171 849 PANTHER FORMIN-RELATED 375 849 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo07g1171 849 PANTHER FORMIN-RELATED 3 367 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo07g1171 849 SMART it6_source 399 812 IPR015425 -
Amo07g1171 849 MobiDBLite consensus disorder prediction 57 112 - -
Amo07g1171 849 SUPERFAMILY Formin homology 2 domain (FH2 domain) 412 811 - -
Amo07g1171 849 PANTHER FORMIN-LIKE PROTEIN 375 849 - -
Amo07g1171 849 PANTHER FORMIN-LIKE PROTEIN 3 367 - -
Amo07g1171 849 MobiDBLite consensus disorder prediction 190 222 - -
Amo07g1171 849 Pfam Formin Homology 2 Domain 406 797 IPR015425 -
Amo07g1171 849 MobiDBLite consensus disorder prediction 334 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1171 Amo-Chr7 25323129 25327709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1171 342 840 FH2 protein (formin) Gene Family AT5G67470 68.327 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1171 - - gmx:100803578 930.243