Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1168 ATGGAACATTCAAGATTCCAAAAAGTTCTTCCAAGCAATACAATGGAACCAAGAAATGGTGAATTCCAGCCTGGGTTGCAGCCAATGATGCAGGATCGACCGGATGACATGCATACAATTAGAAGACCACCTAATGTTAGTACGGCACAAGCCAAACCTGTACTTAATTTTTCCATACAGACAGGTGAGGAATTTGCTCTCGAATTTATGAGAGATAGGGTGAATCTTGGGAAGCCTATGTTTCCAAATGTCGGTGACACTAATTATACACCAGGTTATATGGATCTAAAAGGCATCTTAGGCATTAGTCATCCAACATCAGAAAGTGGATCAGACATTTCCATGCTTTCAATGGTTGACAAATATCCAAAAGAGTTCGAAAGAGTGAACACATCATTGCAGGGAGACAAAAGCAATTATGGGTCAATTCGATCAATACCAAGAACTTCAATGACTCAGGACAGTAGACAACTTGTGCAGAAGTATGGCTCTTCTCGAGGTTCCGATAGCTCATCAATGCTGTTGAAGTTCCTTTGCAGCTTTGGTGGGAGAATATTACCTAGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGTGATACACGTATTCTTCGTATAAGAAAGAATATATCTTGGCAGGAGCTCTTGCAGAAAGCATTATTAATGTATAGTCAGGTTCATGCAATCAAGTATCAGCTTCCGGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATGTGATGAAGATATGCAGAATATGATGGAAGAATGTAACCATCTAGAAGACAGAGAAGGATCACAAAAGCCTAGGATGTTTTTGTTCTCATTGAGTGATTTGGAGGACGCTCAATTTGGTCTCAGTGGTTTGGGTGATGATTCTGAGATCCAATATGTTGTTGCTGTTAACGGCATGGACATGGGATCAAGAAGAAACTCAACCCTGATTGGCGTGAACTTTTCAGCAAATGATCTGCATGATTTGGACAGGCAGAACACTGAAAGGGAGACTGGTAAAGTTGCTGTTGAATCTGTAGGTGTCAACAATTCTCTCCTGAATAACAAATTTGACTCATCACCAAATGTGGAATCCTTGCAACCAGTGCTACCTACTTCCTCAAATTCTTATGAAAGATATCCACAGTCCTTGCAACCAATGCACCATGGGGATCCTGTTGGTCAATATCATGTATCTAGATCTGTTGTTGAAGACATTCCTACTACTATGCCTCCTCGTGCACTGATTAATCAAGATGGGGTTTTTAGCAAAGGCCATCCACCAGTCGGATTACCAGTACATAATTCTGAAATACCACCAGTGGTCACAAAAAAGAAGGTTGATAGTTTGATTGAACAAGCAAGCGACCAGGGTAAAGTTTTATACTTGGAAACCCCATCCTCAGCTCCTACTCAACTATTTGATGGTTACATGAAAAATAATTTTCCCGAAGCAACAGCTGTAGTTACTATGCCAGAGGGCTATCCAATACCTCCGACAAAAAAGGACCAGCTACAGAACTATGAAGATGGTGCTTCTACATCTAACAGTGGCTTTGCTCCCACTTATGTCGACTCCCAGTCAAATGCTGTTGATTTTAGTTCTCTTAACCCTCCTCCTCTTCCTGAAAGAGTTTACTATTCAGAAAGGATTCCTAGGGAGCAAGTAGATTTGCTGAATCGGTCCACCAAGTCAGATGATTTACATGGTTCTCAGTTTAACATTTCCGATTTACTTTCTGATGCAAAACCCTCAGATTCAGTTACAGGATCTGACGACAACTTGCATAATGGGAATCAGCCTCTCCGATCTGAGGAATTGGGTGTTGCAGCAAAGCCTTTGCCTGCTGATGGCTATGCTACCAAACATCAAATATACAAACATTTTCCTGATCCAAGTAGCCAGTTGAAGTCAAAACTAACTGAGCATGTGAATTCTGAGTTGAAGAAGGTAGTACCAATAGTTGAAGGAAGTAATGATGTAGTAACTAAAGATCATGTTGTTAATTTTGAACCTGAAACTTATTGTAAAGATAATCATATCAAACACCGGCTTGATGAGATAAAAGATAGCAAATCAGAATCTGACTTTCCTACTTTGCATCAGGTTCCCTCTGCTAGGCATCTTGAGGATCCTGCTTCATGTCTTCCCGAGGTCGATTGGGGCAATGCCACTGTTACAGAATCTAATGAAAGTCGCATGGTTCAAGGACTACCTGTTTCTCTAAATGGGAACCAAACTACCAAAGATGATTTTCAACCTTCTTCAAGTGTTGCTTCAAAGACATCACAAGGTGACATTCTAATTGATATTGATGATCGATTTCCCCGTGAAGTGCTTAGTGACATGTATAAAGCTTTACTTGAAGAAGGTTTCTCGGGTCGGCATCCACTAACCTCGGATGGAGTAGGTCTAAGCATAAATGTGAAAAATCATGAACCTACACCTTGGGAATATTTTCACAAACTGGCACAAGAAGGACTCAATAATGTCTCTCTCATTGATCAGGATCATGTTAGTTTTTCACCTGCAATAGAAGAAGTGGAAGATGACGGTAGAACTCAACATGTTACGCCTCTAACAACAGGTGAAATATATCAGAAAGACTTACATGGAAGGGTTGAAACAGAAACTACTATTCTAAAGCCAAATGATCCCCTCGTGAAGGATACTGAAAGTATGCAATTTAATGCTATCATGGAAAACATAAGAGCACAGGAATCAGTTTTTGAGGATGGGAAGTTTGAAACAAGAAATCGTACACCTCCTGTTGATCCTCCCGTAAGTGAAATTGACCCGAATTCTTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAGCTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGTGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGTTTCACCGGTCGATCATCAGAGCAAGAGAGACTGACTTTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCACCCAAATGTTGTGGCATTTTATGGTGTAGTTCAGGATGGACCTGGAGGAACAATGGCCACTGTTACGGAGTACATGGTGGATGGTTCTCTTCGGCATGTATTGCTTCGCAAAGATAGGTATCTAGATCGTCGCAAGAGACTGATAATTGCTATGGATGCAGCTTTTGGAATGGAGTATTTACACTCAAAAAATATTGTTCATTTTGACTTAAAATGTGATAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAGCGGAATACCTTGGTCTCGGGTGGCGTGCGGGGGACTCTTCCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAACAAGGTGTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTGTGGGAAATTCTAACTGGTGAGGAGCCTTATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAATAACACATTAAGGCCAACAATTCCCAGTTACTGCGACTCAGAATGGCGAACACTGATGGAGCAGTGCTGGGCACCAAATCCTGCAGTCAGACCTTCCTTTACAGAAATTGCCCGTCGATTGCGTGTGATGTCTGTGGCAGCTAGCCAGGCAAAGGTGCAGGGCCAAAAGGCGTCTAAATGA 3675 0.4155 MEHSRFQKVLPSNTMEPRNGEFQPGLQPMMQDRPDDMHTIRRPPNVSTAQAKPVLNFSIQTGEEFALEFMRDRVNLGKPMFPNVGDTNYTPGYMDLKGILGISHPTSESGSDISMLSMVDKYPKEFERVNTSLQGDKSNYGSIRSIPRTSMTQDSRQLVQKYGSSRGSDSSSMLLKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKNISWQELLQKALLMYSQVHAIKYQLPGEDLDALVSVSCDEDMQNMMEECNHLEDREGSQKPRMFLFSLSDLEDAQFGLSGLGDDSEIQYVVAVNGMDMGSRRNSTLIGVNFSANDLHDLDRQNTERETGKVAVESVGVNNSLLNNKFDSSPNVESLQPVLPTSSNSYERYPQSLQPMHHGDPVGQYHVSRSVVEDIPTTMPPRALINQDGVFSKGHPPVGLPVHNSEIPPVVTKKKVDSLIEQASDQGKVLYLETPSSAPTQLFDGYMKNNFPEATAVVTMPEGYPIPPTKKDQLQNYEDGASTSNSGFAPTYVDSQSNAVDFSSLNPPPLPERVYYSERIPREQVDLLNRSTKSDDLHGSQFNISDLLSDAKPSDSVTGSDDNLHNGNQPLRSEELGVAAKPLPADGYATKHQIYKHFPDPSSQLKSKLTEHVNSELKKVVPIVEGSNDVVTKDHVVNFEPETYCKDNHIKHRLDEIKDSKSESDFPTLHQVPSARHLEDPASCLPEVDWGNATVTESNESRMVQGLPVSLNGNQTTKDDFQPSSSVASKTSQGDILIDIDDRFPREVLSDMYKALLEEGFSGRHPLTSDGVGLSINVKNHEPTPWEYFHKLAQEGLNNVSLIDQDHVSFSPAIEEVEDDGRTQHVTPLTTGEIYQKDLHGRVETETTILKPNDPLVKDTESMQFNAIMENIRAQESVFEDGKFETRNRTPPVDPPVSEIDPNSLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSVAASQAKVQGQKASK* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1168 1224 SMART serkin_6 942 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1168 1224 CDD STKc_MAP3K-like 948 1205 - -
Amo07g1168 1224 Gene3D - 193 275 - -
Amo07g1168 1224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1067 1079 IPR008271 GO:0004672|GO:0006468
Amo07g1168 1224 MobiDBLite consensus disorder prediction 499 521 - -
Amo07g1168 1224 Pfam Protein tyrosine and serine/threonine kinase 943 1205 IPR001245 GO:0004672|GO:0006468
Amo07g1168 1224 SMART PB1_new 189 276 IPR000270 GO:0005515
Amo07g1168 1224 Gene3D Transferase(Phosphotransferase) domain 1 1030 1224 - -
Amo07g1168 1224 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1224 - -
Amo07g1168 1224 PRINTS Tyrosine kinase catalytic domain signature 1061 1079 IPR001245 GO:0004672|GO:0006468
Amo07g1168 1224 PRINTS Tyrosine kinase catalytic domain signature 1176 1198 IPR001245 GO:0004672|GO:0006468
Amo07g1168 1224 PRINTS Tyrosine kinase catalytic domain signature 1132 1154 IPR001245 GO:0004672|GO:0006468
Amo07g1168 1224 PRINTS Tyrosine kinase catalytic domain signature 1024 1037 IPR001245 GO:0004672|GO:0006468
Amo07g1168 1224 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Amo07g1168 1224 ProSiteProfiles Protein kinase domain profile. 942 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1168 1224 MobiDBLite consensus disorder prediction 504 521 - -
Amo07g1168 1224 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 86 1224 - -
Amo07g1168 1224 ProSitePatterns Protein kinases ATP-binding region signature. 948 973 IPR017441 GO:0005524
Amo07g1168 1224 CDD PB1_UP2 178 274 - -
Amo07g1168 1224 MobiDBLite consensus disorder prediction 577 599 - -
Amo07g1168 1224 MobiDBLite consensus disorder prediction 577 604 - -
Amo07g1168 1224 Gene3D Phosphorylase Kinase; domain 1 935 1029 - -
Amo07g1168 1224 SUPERFAMILY CAD & PB1 domains 190 277 - -
Amo07g1168 1224 MobiDBLite consensus disorder prediction 1 24 - -
Amo07g1168 1224 SUPERFAMILY Protein kinase-like (PK-like) 926 1204 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1168 Amo-Chr7 25258761 25266932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1168 49 574 MAP Kinase Kinase Kinase AT1G16270 40.133 6.03e-94 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo07g1168 PK_Tyr_Ser-Thr 1.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1168 - - aip:107612789 2385.14