Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1140 ATGGGTGAACTTCCAAAGCCACCGCCATCAAAGCAACCGCCTTGGTTGCCAATCGTCTCTGGCGCTGTACGAACTTTGAAGCCACCGTCATCGCCGCAACTGGTCTCACCTCGTTCCTCCATCGCGCAACCACTGTCCCGCCACGCCGCCTCTGTTCCACCGCGTCAGCCCCACCGTCGTGCTCCTTATCCCGCTCTATGCTCTATCTTGAAGGATCTAGGTTCTGAGAATGGTGACATTGTGAACTATGCAACTGTGGTCAGAGAAGTGAAAGCATATTTGAAGAAAGATGTTGCAGCAAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGCGTCGAAAAAGTGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAAGGTGATATTGTGATAAGAAGGACTCTCAGGTATGGAAGAATGCTCAACCATTCATTGATTGGCTTTGGAATGCTGAATCAGAATCGGAGGAAGAATGAGAAAAGTTTGTGCTCAGTTATTGAATGGAATTGCCTCAGTTATTGA 759 0.4677 MGELPKPPPSKQPPWLPIVSGAVRTLKPPSSPQLVSPRSSIAQPLSRHAASVPPRQPHRRAPYPALCSILKDLGSENGDIVNYATVVREVKAYLKKDVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKVFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALILKALYDVDLVEEEHVVHWYSKGLKGDIVIRRTLRYGRMLNHSLIGFGMLNQNRRKNEKSLCSVIEWNCLSY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1140 252 SMART 542_3 142 216 IPR003307 GO:0005515
Amo07g1140 252 MobiDBLite consensus disorder prediction 27 46 - -
Amo07g1140 252 ProSiteProfiles W2 domain profile. 73 252 IPR003307 GO:0005515
Amo07g1140 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 72 207 - -
Amo07g1140 252 MobiDBLite consensus disorder prediction 27 59 - -
Amo07g1140 252 Pfam eIF4-gamma/eIF5/eIF2-epsilon 156 205 IPR003307 GO:0005515
Amo07g1140 252 SUPERFAMILY ARM repeat 83 203 IPR016024 -
Amo07g1140 252 Gene3D - 76 214 - -
Amo07g1140 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 72 207 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1140 Amo-Chr7 23626864 23628008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1140 77 206 Eukaryotic Initiation Factors Gene Family AT1G77840 47.101 2.70e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1140 K03262 - aip:107619007 246.514