Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1135 ATGAGAAACAGGAAAAGTCACGAAACAACCTTCACCACGCTACAGTTCGTTGTTCGTCGTCGTGATTCGCGTACTCATGCTATCACATGTGCTTTATTTGCTCTCTTAAGGCATGGAGATGAGTTATTGCCAGTTGTCGGTGCACCATATGATACCCTAGAGGAAGTAATTGGGAAAAGTGACTCTGGTGGACTAGGTTCCCTCCAAGATTTTGGGGTCAAATACAGAGAATTTGTGCCACTTGCATGTAGAAATCCATGGAAAGGCATTCTCCTTTTTGGCCCACCAGTGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGTCAGACTACATTTTTTAATATTTCAACATCATCTGTTGTCAGCAAATGGCGAGGCATGTTACTCATAACTCTTCCCCCACCCCCCTCTTTTGTCCAAAGTTATTCTGAGAAGTTGATAAAGGTGTTATTTGAGCTTGCAAGATACCATACCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGTCAACCCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAAAACGGAACTACTCATACAGCTGTCCTTGGATAAAATCAACTATGATAGAATTCGAACTCGTCAGAAGGAGAGAGTTTTAGGTTCCATCACTGAGGTTGTCCAAACTGTGAAGGATCCAAAATCCTCTAGTAAGCCTATGATTGAAGAAAATGCTACCAAGCATGAAGAGAAAGAGAAGTTTGATTTTGAATTTATTTTGCCAAAGTCTGTTGAAGCTGGGAATACAAGTAAATTTAGCAAACAAACTCCTCCCAAGAATCCTGAAACTGATGTATCACGCTTGAGTTCTTATGAGAAGAGGAGCAAGGCTTCAAGAAAATCTGCACAAATTTCTTTAAAGGGCTCTTTTCTCAATACCAGTATTATATTTGCATCTGATAGCTTCCTTGAACTTACCGAATATATGTCAGATGCGCCACAAGGAGCAGCAGTGAATAACTTTGTCATTCAGTTAGCACTCTCAATGGTGGCTTCGGAAAGCATGAAAATTTATCAAGATATTAGTGATGGCACAGTCAATATGCTTGATAAGACTGAGAGACTATCAGAGTTTTATGAAATATGGCGTAATCTTGATATGGGATATGGAGAGAAGTTTATTAAAGTTGAGCAGGGATGGTTGATAGCAACCCAAGTGGCTAATGATAAAACTGCGTCTCCAAAAGAAGTTGTGGCTATCGAATACAAAAAAGTACCGAAAACGCAGGAGAAAAGTCTACCTACACCCCCTGCAGCTCCACCTTCTGAGCCTGTGAAAGAGGAAGAACCTCCGACACATCCAGCGCCAATTAGAGCTTTGGGTGATTACGCTTTCATGCTGCGTGATTATGAACTTGCTTTGTCAAAATGA 1422 0.4107 MRNRKSHETTFTTLQFVVRRRDSRTHAITCALFALLRHGDELLPVVGAPYDTLEEVIGKSDSGGLGSLQDFGVKYREFVPLACRNPWKGILLFGPPVTGKTMLAKAVATECQTTFFNISTSSVVSKWRGMLLITLPPPPSFVQSYSEKLIKVLFELARYHTPSTIFLDEIDAIISQPGEARSEHEASRRLKTELLIQLSLDKINYDRIRTRQKERVLGSITEVVQTVKDPKSSSKPMIEENATKHEEKEKFDFEFILPKSVEAGNTSKFSKQTPPKNPETDVSRLSSYEKRSKASRKSAQISLKGSFLNTSIIFASDSFLELTEYMSDAPQGAAVNNFVIQLALSMVASESMKIYQDISDGTVNMLDKTERLSEFYEIWRNLDMGYGEKFIKVEQGWLIATQVANDKTASPKEVVAIEYKKVPKTQEKSLPTPPAAPPSEPVKEEEPPTHPAPIRALGDYAFMLRDYELALSK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1135 473 Gene3D - 74 216 IPR027417 -
Amo07g1135 473 MobiDBLite consensus disorder prediction 264 282 - -
Amo07g1135 473 PANTHER AAA DOMAIN-CONTAINING 83 199 - -
Amo07g1135 473 SUPERFAMILY GAT-like domain 329 394 - -
Amo07g1135 473 CDD AAA 75 173 - -
Amo07g1135 473 SMART AAA_5 86 261 IPR003593 -
Amo07g1135 473 Pfam ATPase family associated with various cellular activities (AAA) 90 203 IPR003959 GO:0005524|GO:0016887
Amo07g1135 473 MobiDBLite consensus disorder prediction 264 291 - -
Amo07g1135 473 MobiDBLite consensus disorder prediction 424 454 - -
Amo07g1135 473 Pfam ANTH domain 325 372 IPR011417 GO:0005543
Amo07g1135 473 PANTHER KATANIN 83 199 - -
Amo07g1135 473 Gene3D ANTH domain 312 374 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Amo07g1135 473 Pfam Methionine gamma-lyase 23 78 IPR009651 -
Amo07g1135 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1135 Amo-Chr7 23259174 23263809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1135 86 198 Calmodulin-binding Proteins AT3G56690 37.168 2.54e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1135 K07767 - pop:7470183 169.088