Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1132 ATGAAGTTCACCGGCCACAATGCCACCGCCACCCAGCGCGGAGGAACCGGAGCCGGAGGCGGAGGCCGTGGCCGGAATCTCMTCGTTGGTGTGAAGTTGGATCCCTGGAGCCGGGAGCTGCTGACGTGGACGCTCCTCAAGGTCGCCGAGCCCGGCGACGTCGTCATTGCGCTTCACGCCGTCTCCTCAGAGAATGCTGCATCTATGCTCTCTCTTGTGAAGGCTTTTGATTCAGTTCTTGGTGTGTACGAAGGCTTCTGCCACTTGAAGCAGGTTGAGCTGAAGCTTAAAGTGTGTAGAGGCACATCGGCGCGGAAACTGCTTGTGCAGGAAGCGGAATCTCTTGGTGCTGATACGGTTATTTTAGGAACTTCTCAGAGCTTTTACGCGCTCCGGTCTTCGGCAGCCATTGCCAAATACTGCGCAAAGAAATTACCTAAGTGTGTATCTGTATTTGCTGTTGATAGTGGCAAAGTTGCATTCCGCAGAGAAGCTACTGTTATGAGTAGTGATCAAGTAAAACCAAATGCAAGCCCCACCTTCATAAGCAAATCTTTATCGAAAAAGAGAAGCCAGAAGAGCAATGAATGCTGTGTACGGCTGTTAGTGTTGCCAGATAGTTCTACAACCACACATAAGGAGGGGTTGGCTGATAGTCAYAGACAGGAAAATTCACTGGCTTTRGTGCCAATTCAAAAGCCTGATGATGCTTCTAATTATTCGATTCCGGTGGTCAAATCAGACTGTTCAAAACCAGATAGTTCTGCAGCTCTACYTAAGGAAGGGTTGAATGATAGTCAGAGACAGGAAAATTCACTGGCTTTGGTGCCAATTCAAAAGCCTGATGATGCTTGTAGCTATTYGAATGCAGTGGTCAAACCAGACCGTCTAAAACATGGTTGGTTGCTACTGCGCCAGGTGTTTCTGCCAAAAAGGAATAAGCAGAAATYTSTGGTGAAAAATACCCCTTCTTTTCACCTGGCATCAGRACAACCYAACTCTCCTTCTGCTGTAGTCCATGTTGATGAGGAACAGAATATTGATCCTATTGGCRATTGCAAWCTAGATGCAGAGAGTGGTGCCATTGTGCCATATGAATCGGATGATATTGCTACTCCTTCTCCACTTTTTTGTCATTCCAGTGTCACTCCTGAAGAATTGTTGGCCTTACAAGAGAAATACTCATCTTCCTGCAAATTGTATAGTTTCCAAGAACTTGTATCCGCAACAGCAAACTTCTCGAGTGAAAATTTGGTTGGAATAGGTGGGTGTAGTCATGTTTACAGAGGATGTCTTGCAGAGGGCAAGGAATTGGCAATCAAAATTTTGAAGCCATCTGAAAATGCTATAAAAGATTTTGTTAAGGAAATTGAGATCGTCACAACTTTGCATCATAAGAACATSATATCTCTATCTGGATTTTGTATTCACAGCAATAATTTACTACTGGTTTCTGATCTTTTATCAAGGGGAAGCTTAGAAGAAAACCTYTATGGCAACAAGAATGATTGCAGKGCATTTGGTTGGCAAGAGAGGTACAAGGTAGCTGTGGGTGTAGCTGAGGCATTAAACYATCTGCATAATCGATCTGCACATCCTGTGATCCATAGGGATGTAAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGCCTCAGCTGTCAGATTTCGGACTGGCTAGTTGGGGTGCTTCTTCATCCCATACAAGTACTGATGTAGCTGGAACTTTTGGATACTTAGCTCCTGAGTATTTTATGCATGGTAAAGTGACTGACAAAATTGATGTATATGCTTTTGGTGTTGTACTTCTTGAGCTTCTCTCAAGTAAGAAGCCAATTAATAATGTATGTCCTAAGGTCCAACAGAGYCTTGTTACGTGGGCAACGCCAATTTTGAAGGAAGGAAAGCTTTCTGAGTTACTTGATCCAAGTCTAGGTAGTGATTACAACCATTWTCACATTCAAAGAATGGTTCTAGCTGCGACTCTTTGCATTAGACGATCTTTTAGATGGCGGCCTCATATCAGCCTTATATTGAAGCTCCTACAAGGTGTTGAAGAAGTGATAAGATGGGCAGAAWAAGAAGTTAATGCATCGGAGGAGCTTGACAGATTAGATGGGGAGCCAGTTTCAATTGATATTCAGTCGCATCTAAGCCTTGCTTTGCTGGACATAGAGGATGATACAGATTCAATTAGTAGCACTGAGCAGTTTATATCAACTGAAGACTATTTTAGGAGAAGATGTAGTCGCTCGTCAAGTTTTGCCTAG 2271 0.4328 MKFTGHNATATQRGGTGAGGGGRGRNLXVGVKLDPWSRELLTWTLLKVAEPGDVVIALHAVSSENAASMLSLVKAFDSVLGVYEGFCHLKQVELKLKVCRGTSARKLLVQEAESLGADTVILGTSQSFYALRSSAAIAKYCAKKLPKCVSVFAVDSGKVAFRREATVMSSDQVKPNASPTFISKSLSKKRSQKSNECCVRLLVLPDSSTTTHKEGLADSHRQENSLALVPIQKPDDASNYSIPVVKSDCSKPDSSAALXKEGLNDSQRQENSLALVPIQKPDDACSYXNAVVKPDRLKHGWLLLRQVFLPKRNKQKXXVKNTPSFHLASXQPNSPSAVVHVDEEQNIDPIGXCXLDAESGAIVPYESDDIATPSPLFCHSSVTPEELLALQEKYSSSCKLYSFQELVSATANFSSENLVGIGGCSHVYRGCLAEGKELAIKILKPSENAIKDFVKEIEIVTTLHHKNXISLSGFCIHSNNLLLVSDLLSRGSLEENLYGNKNDCXAFGWQERYKVAVGVAEALNXLHNRSAHPVIHRDVKSSNILLSDDFEPQLSDFGLASWGASSSHTSTDVAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELLSSKKPINNVCPKVQQSLVTWATPILKEGKLSELLDPSLGSDYNHXHIQRMVLAATLCIRRSFRWRPHISLILKLLQGVEEVIRWAEXEVNASEELDRLDGEPVSIDIQSHLSLALLDIEDDTDSISSTEQFISTEDYFRRRCSRSSSFA* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1132 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Amo07g1132 756 Pfam Protein kinase domain 415 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1132 756 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Amo07g1132 756 PANTHER OS01G0253100 PROTEIN 21 750 IPR045271 GO:0004714|GO:0006468
Amo07g1132 756 SUPERFAMILY Protein kinase-like (PK-like) 394 689 IPR011009 -
Amo07g1132 756 Gene3D HUPs 25 154 IPR014729 -
Amo07g1132 756 MobiDBLite consensus disorder prediction 1 23 - -
Amo07g1132 756 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 21 750 - -
Amo07g1132 756 SMART serkin_6 413 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1132 756 CDD USP_Like 29 149 - -
Amo07g1132 756 ProSiteProfiles Protein kinase domain profile. 413 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1132 756 Gene3D Transferase(Phosphotransferase) domain 1 488 702 - -
Amo07g1132 756 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1132 Amo-Chr7 23154392 23158025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1132 397 682 Glycoside Hydrolase AT3G07070 40.893 2.78e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo07g1132 Pkinase 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1132 - - gmx:100815722 796.964