Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1115 GAGAAAGAGAAACTAACAGCAATAAAGAAACTAAACCTATTACATATATACGAACCTTATTATATAGTTTTCATTTCATCCGTTCTTCTTCTTCTTCTTATTCTCTCTCAAATGCACATTCTAAGTTATTACTCATCACAACAAGGCAATAATAATAATAATAATACAATGCAACCCTCATCCTCTATGGAAAACAATGATTTGGAGAACAACAATAGCAATAAGGGAGTTTCAAACAACATCAATGGTAGTGGTAGTGGTATTTTTGCAAAGACACCATCAATGGTGGTGAGAAAGAAGTCATCATCAGAAGATTCAATTATTGTCACAAACAATAGCAATGGTCGAATGGAAATGCTTAGGAATTTCGTGACAAATTTGAGAGAGGTCATTCTTGGAACTAAGCTTGCTGTGCTTTTTCCGGCAGTGCCTTTGGCTGTTGCTGCAGATTTGTATAGCTTTGGAAGGCCGTGGATATTTGCATTAAGCTTAATCGGACTTGCCCCGCTAGCAGAACGTGTCAGCTTCCTCACTGAGCAAATTGCCTACTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCTACATGTGGAAATGCAACGGAGATGATAATTGCATTATTAGCACTGCGCAAGAACAAAGTGGATGTTGTCAAGTTCTCCCTTTTGGGTTCCATTCTCTCGAACCTTCTTTTGGTTCTTGGTAGTTCACTCCTTTGTGGTGGCTTGGCCAACCTTAAGAGGGAGCAAAGATATGACAGGAAACAAGCAGATGTGAACTCACTGCTATTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTACTGTTCAGATACGCATTAGCAGGGGGAAGTTATTCAATTGCCACTTCTACCCTTCAGTTATCAAGAGCAAGCAGTGTTGTCATGCTAATTGCATATCTTGCATATATTGTTTTCCAGTTAAAAACTCATCGAGTAATATTTGATGCACAAGAGGAAGAAGATGATGAAGAAAAGGCCGTTTTAGGATTTTGGAGTTCATTTTCATGGTTGGTTATTATGACATTGGTCATATCTGTGCTGTCCGAATATGTTGTGGGAACAATTGAGGCTGCTTCAGATTCTTGGGGCATTTCGGTTAGCTTCATTAGCCTAATCTTGCTTCCAATTGTTGGGAACGCTGCTGAACATGCTGGTGCAATCATATTTGCTTTTAAGAACAAGTTGGACATATCTTTGGGCGTTGCTATGGGATCGGCAACTCAAATTTCCATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATTCGAATGGATCTGGACTTCAATCTTCTTGACACAGGGTGTCTTGCTTTGGCAATTCTTGTTACGGCATTTACTTTACAGGATGGAACTTCACATTACTTGAAGGGAGTTGTTCTTACCCTATGTTACATTGTAATTGCTGCGTGCTTTTTTGTTCTCAAAACTCCATTTACCGACGACCCTGACATCGAAACTAAAACATCCTATCATGCTGTGGCCTAA 1521 0.4011 EKEKLTAIKKLNLLHIYEPYYIVFISSVLLLLLILSQMHILSYYSSQQGNNNNNNTMQPSSSMENNDLENNNSNKGVSNNINGSGSGIFAKTPSMVVRKKSSSEDSIIVTNNSNGRMEMLRNFVTNLREVILGTKLAVLFPAVPLAVAADLYSFGRPWIFALSLIGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKVDVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRYALAGGSYSIATSTLQLSRASSVVMLIAYLAYIVFQLKTHRVIFDAQEEEDDEEKAVLGFWSSFSWLVIMTLVISVLSEYVVGTIEAASDSWGISVSFISLILLPIVGNAAEHAGAIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLDTGCLALAILVTAFTLQDGTSHYLKGVVLTLCYIVIAACFFVLKTPFTDDPDIETKTSYHAVA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1115 506 MobiDBLite consensus disorder prediction 48 86 - -
Amo07g1115 506 PANTHER VACUOLAR CATION/PROTON EXCHANGER 64 494 - -
Amo07g1115 506 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 64 494 IPR004713 GO:0006812|GO:0008324|GO:0016021
Amo07g1115 506 TIGRFAM caca2: calcium/proton exchanger 122 484 - -
Amo07g1115 506 TIGRFAM cax: calcium/proton exchanger 141 484 IPR004798 GO:0006816|GO:0015369
Amo07g1115 506 Pfam Sodium/calcium exchanger protein 158 315 IPR004837 GO:0016021|GO:0055085
Amo07g1115 506 Pfam Sodium/calcium exchanger protein 341 482 IPR004837 GO:0016021|GO:0055085
Amo07g1115 506 Gene3D - 187 333 IPR044880 -
Amo07g1115 506 Gene3D - 334 485 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1115 Amo-Chr7 22298238 22302806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1115 120 492 Antiporters AT2G38170 69.816 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1115 K07300 - gmx:100802344 602.053