Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1096 ATGGAGTGCGGGAGGAAAGTTATACCTGTGTTTTATGGTGTGGATCCATCTGATGTACGAAAGCAGCTAGTAAGTTTCAATGAAAAATTCAAGTCTCACTTGCAGAGTAACATTAACGATCTTCTGAAATGGATGGATGCTCTCGCCAAAGTTGCGGATTTAGAAGGCTGGGATTCCTGCTCTTGTAGGGACGACTTTGAACTTGTTGAAAAGATTGTCAAGGATGTTTTGCGAAAGCTGAATAATCCTTGCCTGCCTAAGGATATCAAGGGTGTAGTTGGTATTAATAAAAATCTTGAAAAGTTAGAATTGTTATTAAGTTCGGTTCCTGATGAACAAACTGGAATAATCGGGATTTGTGGGATGGCAGGAATAGGCAAGACGACTGTAGTGAAGAAATTATTTGAGAAACATTCTTATCGGTATGAAGGTTCCTGTTTCTTAGAAGGTGTTCTGGAAAGATTGGAAAAGTATGGGCAGGAGATAGATGAGTTGTGTAATCAACTTCACTCCAAGTTGTTAGAAGGAAAAGACTTCCCAAATAGCATGGCAGATACAAATTCTGCAAAGTGCTGTCTCTGCAGACAAAGAAGTTTCATAGTTCTTGATGATGTGGGTAGTTCAAAGCAATTAGAATACCTAGTTGGAGACCTTCAATGCTATGGTGCAGGAAGTAGAATAATTGTAATTACAAGGAACAAGAGTGTGCTGGAAAAAAGAGTTGAAAAAATTTATAAGATGGAGGTGTTAGATTTTCAAGATTCCCTTACTCTGTTTAGCTTGAATGCATTCAATCAAAATTATCCAAAAACGGGATACCAAGAGCTATCATGGAAAGCAGTTACCTATTGCAAAGGTGTCCCGTTAAATTTAAAAGTATTGGGTTCTTTTCTTCATTCCAAGAGTGAAACTGAATGGGATAGTGCGCTGCAAAAACTCGAGAAGAATCCTAATGCATCAATTCAAAATGTGTTAAGATTGAGTTATGATGGGTCAGATTATCAGCAGAATCACATTGTTTTAGACATTGCAACATTTTTTAAGGGAGAGCAAAAAGAACAGAGAATTGATGTATTAATAAGTTCCCTTCTTGATGAGGCTCTATTAGCTATATATGAACATTTTGAGTTGTTGCAGGATTTGAACAAGAAATGGGGAGGGGAATCATTAGTCAGAAATCTATCAAGAATCCTGAAAATCATAGCCATTTGTGGGGTTTTGGTGATAATTGTGATGTTTTGGAAAACAGCAAGGTATCGGACATAA 1266 0.3728 MECGRKVIPVFYGVDPSDVRKQLVSFNEKFKSHLQSNINDLLKWMDALAKVADLEGWDSCSCRDDFELVEKIVKDVLRKLNNPCLPKDIKGVVGINKNLEKLELLLSSVPDEQTGIIGICGMAGIGKTTVVKKLFEKHSYRYEGSCFLEGVLERLEKYGQEIDELCNQLHSKLLEGKDFPNSMADTNSAKCCLCRQRSFIVLDDVGSSKQLEYLVGDLQCYGAGSRIIVITRNKSVLEKRVEKIYKMEVLDFQDSLTLFSLNAFNQNYPKTGYQELSWKAVTYCKGVPLNLKVLGSFLHSKSETEWDSALQKLEKNPNASIQNVLRLSYDGSDYQQNHIVLDIATFFKGEQKEQRIDVLISSLLDEALLAIYEHFELLQDLNKKWGGESLVRNLSRILKIIAICGVLVIIVMFWKTARYRT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1096 421 Coils Coil 148 168 - -
Amo07g1096 421 Pfam TIR domain 4 82 IPR000157 GO:0007165
Amo07g1096 421 Gene3D - 249 333 IPR042197 -
Amo07g1096 421 PRINTS Disease resistance protein signature 116 131 - -
Amo07g1096 421 PRINTS Disease resistance protein signature 192 206 - -
Amo07g1096 421 PRINTS Disease resistance protein signature 284 298 - -
Amo07g1096 421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 359 IPR044974 GO:0006952
Amo07g1096 421 Pfam NB-ARC domain 97 321 IPR002182 GO:0043531
Amo07g1096 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 342 IPR027417 -
Amo07g1096 421 ProSiteProfiles TIR domain profile. 1 80 IPR000157 GO:0007165
Amo07g1096 421 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 56 IPR035897 -
Amo07g1096 421 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 359 - -
Amo07g1096 421 Gene3D - 1 56 IPR035897 -
Amo07g1096 421 Gene3D - 67 246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1096 Amo-Chr7 21454417 21456227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1096 5 374 WRKY Transcription Factor Family AT4G12020 27.676 1.23e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1096 - - adu:107465381 825.469