Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1086 ATGGACGTGGAATCATCGGAGTCCGCCGCGTATCCAGGGTCCGGTAGTATGCAAATTCCAATAGATCTCTTCGGTTCCAAAGAGCACCATGGAATGCCACGTGGCACCCTGGCGTTCGCCGACGAATCCGGTAACATAGTCTACAAGGTCAACCGCCACAATTCTTCTCCCAAGGACAAGAAACTCTTGCTCGATGCTTCCGGCAACGTCATCTTCTCCATACACCGCTATCAAAAGGGGAGTTGGAAATGTTACAAGGGAGAAAGCAACGTGGAAACGGATATGGTGTTGAGGGTGCAGAGGACAGTTAAGAAGTTGAATATAGTTGAGTTACAAGTGTTTTATGGCGGCAACAATGGCGAAGCCTGTGATTTGATCATGAGGGGTTCTCCTTGTATGCGATCATGTGGCATTTATAAAGACACTGAAATTGTTGCTCAGACTAGCCTAATGTACAAGCTTCACCAAATATATGCAAGTAGGGGTAAATTCCGCATAACGATATTTCCAGGAACTACTGACCGTGCTGTTATTGTTGCTTTGTTTGTAATATTTTTGAATGGACGAAAATAA 573 0.4503 MDVESSESAAYPGSGSMQIPIDLFGSKEHHGMPRGTLAFADESGNIVYKVNRHNSSPKDKKLLLDASGNVIFSIHRYQKGSWKCYKGESNVETDMVLRVQRTVKKLNIVELQVFYGGNNGEACDLIMRGSPCMRSCGIYKDTEIVAQTSLMYKLHQIYASRGKFRITIFPGTTDRAVIVALFVIFLNGRK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1086 190 PANTHER - 4 187 IPR007612 -
Amo07g1086 190 Gene3D - 16 189 IPR038595 -
Amo07g1086 190 PANTHER PROTEIN LURP-ONE-RELATED 7 4 187 - -
Amo07g1086 190 SUPERFAMILY Tubby C-terminal domain-like 30 184 IPR025659 -
Amo07g1086 190 Pfam LURP-one-related 20 184 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1086 Amo-Chr7 20725053 20727584 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1086 - - gmx:100806708 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0048 11 679451 683093 Amo07g1086 07 20725053 20727584 PCT
Amo01g0626 01 9099044 9102589 Amo07g1086 07 20725053 20727584 PCT
Amo07g1086 07 20725053 20727584 Amo11g0048 11 679451 683093 PCT
Amo07g1086 07 20725053 20727584 Amo01g0626 01 9099044 9102589 PCT