Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1078 ATGAATACAGCTACATTGAATGCCTCAACAACCACCTTGGGACATGAGGCAACCACAACTAATAACACCATATGGGTGTGTGAACGCTTCACAAGGGCTGCAAGGTCAAGAGGAATATTCTTCAGTGATAACCCTTTGTCTTACACAATGCCAGTGCTTATTCTTCAAACCTCCGTTGTTGCATTGATCACCACAACCTTACAACTCCTATTAACCCCCTTTGGCCAAAGTAGTTTTGTTCCCCAGATGCTGGGAGGATTAGCACTAGGACCATCCATCCTGGGACAAATCGGTGTGGTTCGAAAGTATTTGTTCCCACCAAGAACCTTCTACGTGAGCGAGACCATCGCCTTTTTCGGCAGCATGATATTCATGTTCCTCATAGGAGTCAAAATAGACCTAACCTCAATAATCACAACGGGTAAAAAAACGTGGGCAATTGCACTCTCTTGTTTCGTATTCCCCATCGTTTTCACCGCAGTAACCGCCCTCACACTCCGCGCACTATTCCTGCTCCCTCAAGAAAACCTCTACACTTCCATCTTCTACGTCTCTTTCTACTTATCAAGCTGTTCGTTCCACTCCACAGCAAGCCACCTCGCAGATCTGAAGCTCTTGAACTCTGAGCTTGGCCGTTTGGCCGTTTCTTCCTCCATGATTTCTGGAACAATCTCTGCTGTTTTGATAACTTCAGTTTTCTCACACCATGGTTTGAGGAAGGGCTCTAGGTCGTTGCAAATGGCGTCGCTATCGTTTCTTTTCTTGGTGGCTGTCATAGTTTTTGTTTGTAGGCCCATTATAATGTGGATGATAAGGCGAACCCCGGAAGGAAAGCCCATTAAGGAAGCCTACATAATTACGATTTTCGTAATGATGTTGTTGTCTGCGTTGTTTAGTGAGCTTATTGGGGGGCATTTTATGACTGGGCCTATACTTTTGGGCCTTGCTGTGCCTGATGGGCCACCTTTGGGCTCAGCGTTGAGTGAGAAGCTGGATGCTTTGGTTTCGGCAGTGTTCTTGCCGTTGTATTTTCTTTTCAGTGGGGCAAGGTTTAATTCCTTTGCACTTGATGCAACGAGCTTTGCGGTTGTGCAGGTTTTGGCTATAAGTAGCTTCCTTGGGAAGATTTTTGGAGCAATGTTGCCTTCGCTTTATTGCAAGATGTCTGTCACTGATTCTCTTTCCTTAGGTCTTATCATGAGTGCACAGGGCATCACTCAAATGCTCTACTTGCAAGGTTCTATGTACCTCAAGATTATAGATACGGAAACATATGGCAATGTGGTGATATCAATGATATGGTTAACCGGAGCAACCACACCTTTAGTGAAATTCCTATATGACCCTTCGAAGAGGTACTTAGCCATAAACCGAAGAAGAACCATTGAACATGCATCTCCAGACGTGGAACTCCTCCTTATGGCATGCATTCACAACGAAGAAAACACACCATCCATGATCAACATTCTCGACATGTCAAATCCAACGGAACAAAGCCCCATTTGCTTCTACGTCCTTCATCTCATTCAATTAACCGGAAGAGCAACACCGCTCTTCATAGACCACCAATCCACTAGCAGCAAAACAAATTCCCTATACTCCACCCATTCTCAACACATCATCAACGCTTTCAGATCTTACGAGCAGCAAAATGTCGACAAACTTGTCGTCAATCTCTTCTCATCCATTTCTCCTTATGAAACAATGCATGACGAGGTTTGCATGCAAGCCGCGGAGAAAAGGGTCTCTATGCAATGGAGTTCCAACGGTGTAGTAACTGAATCAGCGCATCCGATTAGGGCATTCAACCGTCAAATATTGAGAACTGCGCCTTGTTCGGTAGGAATACTGGTTGATCGTGGAACTTTGAGCAAGAGCAATTATTTAACGTCTGCTTCCTTCTATAGCGTCGGAGTCTTGTTCATAGAAGGCTCCGACGATCGCGAAGCGTTGGTTTACGCGATGCGCATGGCGGATCATCCTAATGTGAGTGTTACAGTGGTTAGGTTAATAGAGCCAAGAAGAAAAAGTAGGAACTTAATGATGAGAGATCCAGATGGGGATTTAATTCATAAGTTTAAAGTAGAGCACTGCATTCAAATCAAAAGACATGACTATAGAGAAGAAGTGGTGAGGGATAGTGTTGAGATGATTAGTGCGATTAAGTCTTTGAATGGTTGCTTTGATTTGATTATGGTGGGTAGGCGCCATGCGAATGGTGAATCTTCATCGTTGTTTAATGGAATGAATGAGTGGAATGAGTATCCTGAACTTGGTGTTGTAGGGGACATGCTTGTTTCTTCGGATTCTAGTTATGATGGTTCTGTTATGGTGGTGCAGCAACAAATGTTAGGGTTTGGTGGTGGTGGTTATCATCATCCTGATTTTCATATGGATTCCAATAATGGTCCTATGAACCATCATCCTAGGCAAGAAAGACCCCCGAATGTTGTGGAAGTGCCACGTGATACAAGGGTGTGGCCAATGGTATGA 2493 0.4428 MNTATLNASTTTLGHEATTTNNTIWVCERFTRAARSRGIFFSDNPLSYTMPVLILQTSVVALITTTLQLLLTPFGQSSFVPQMLGGLALGPSILGQIGVVRKYLFPPRTFYVSETIAFFGSMIFMFLIGVKIDLTSIITTGKKTWAIALSCFVFPIVFTAVTALTLRALFLLPQENLYTSIFYVSFYLSSCSFHSTASHLADLKLLNSELGRLAVSSSMISGTISAVLITSVFSHHGLRKGSRSLQMASLSFLFLVAVIVFVCRPIIMWMIRRTPEGKPIKEAYIITIFVMMLLSALFSELIGGHFMTGPILLGLAVPDGPPLGSALSEKLDALVSAVFLPLYFLFSGARFNSFALDATSFAVVQVLAISSFLGKIFGAMLPSLYCKMSVTDSLSLGLIMSAQGITQMLYLQGSMYLKIIDTETYGNVVISMIWLTGATTPLVKFLYDPSKRYLAINRRRTIEHASPDVELLLMACIHNEENTPSMINILDMSNPTEQSPICFYVLHLIQLTGRATPLFIDHQSTSSKTNSLYSTHSQHIINAFRSYEQQNVDKLVVNLFSSISPYETMHDEVCMQAAEKRVSMQWSSNGVVTESAHPIRAFNRQILRTAPCSVGILVDRGTLSKSNYLTSASFYSVGVLFIEGSDDREALVYAMRMADHPNVSVTVVRLIEPRRKSRNLMMRDPDGDLIHKFKVEHCIQIKRHDYREEVVRDSVEMISAIKSLNGCFDLIMVGRRHANGESSSLFNGMNEWNEYPELGVVGDMLVSSDSSYDGSVMVVQQQMLGFGGGGYHHPDFHMDSNNGPMNHHPRQERPPNVVEVPRDTRVWPMV* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1078 830 CDD USP_Like 642 746 - -
Amo07g1078 830 Pfam Sodium/hydrogen exchanger family 60 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo07g1078 830 PANTHER CATION/H+ EXCHANGER 2 22 787 - -
Amo07g1078 830 Gene3D - 52 454 IPR038770 -
Amo07g1078 830 PANTHER CATION/H + ANTIPORTER 22 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1078 Amo-Chr7 20557864 20561697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1078 36 808 Antiporter Super Family AT2G13620 35.856 9.90e-158 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1078 - - adu:107458229 1507.66