Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1061 ATGACTGAGTTACTCGCCGAAAGCACAACACCGTCTTCTTCGTCGCTGCGCCTTCTTTGTCATCTTTTGATTGCAGCACCGTTTCCTGAGGTCTCGTCGCCGTCGTCTTCTGAGGGATGCAAGGAAGGGGTTAGGGTTTGGTGGTGGTGGAAGGAGCTGAATGGAGGAAACCATGAGGAGGAGCTTGATGATGCTAGCATTGATCCTGATGTTGATCTCTCTTACATTAGCATCAAGAGCAAGCAACCAGAAACGACAAATTTTGGCTTTCCAGCATCAGATGTTGGAGAATTGCAGGTTGATTGTCTTATTGGATCTGGAACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCAGATTACTGATAGGTGTTTTGTAAGAAAGCCTTTAGAGCAAGAGCGAATGGCAATCAAGCTTGTTGACTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGACCTAGGAGGTTCTGTGTCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAACTGCTTTGCTAAAGAATGGAAGGTTTTGTGTTGATGGTCTTTCAATATTTGATGGTCTAAGTGTAAAAATTTAG 621 0.438 MTELLAESTTPSSSSLRLLCHLLIAAPFPEVSSPSSSEGCKEGVRVWWWWKELNGGNHEEELDDASIDPDVDLSYISIKSKQPETTNFGFPASDVGELQVDCLIGSGTFGTVYHGKWRGTDVAIKQITDRCFVRKPLEQERMAIKLVDLHHPNVVAFYGVVLDDLGGSVSTVTEYMVNGSLRTALLKNGRFCVDGLSIFDGLSVKI* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1061 206 PANTHER SERINE-THREONINE PROTEIN KINASE 58 190 - -
Amo07g1061 206 ProSitePatterns Protein kinases ATP-binding region signature. 104 135 IPR017441 GO:0005524
Amo07g1061 206 SUPERFAMILY Protein kinase-like (PK-like) 75 191 IPR011009 -
Amo07g1061 206 ProSiteProfiles Protein kinase domain profile. 98 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1061 206 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 58 190 - -
Amo07g1061 206 Gene3D Phosphorylase Kinase; domain 1 92 179 - -
Amo07g1061 206 Pfam Protein tyrosine and serine/threonine kinase 99 188 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1061 Amo-Chr7 20215531 20218296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1061 75 190 MAP Kinase Kinase Kinase AT3G46920 61.364 5.19e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo07g1061 PK_Tyr_Ser-Thr 7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1061 - - pvu:PHAVU_009G209700g 178.333