Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1060 ATGATTTTGGGGCAGCGCGAAAGGGATTGTGTGGACGAGTATATAAATAGTCAGATACACTTCTTGGAGATGTGCCAGTCGGAATTGCGGTTGGATATTTTCCAGTTACAGCAAAAAGAGAATATAAATGAGGAGGAGATAATTAAGAAGTGGATTAAACTTTCCAGCATAGCAATGAGGATATTATTTCCAAATGAAAGGAGACTTTGCGATCGAGCCTTCAACATCTCTTCCATCTCGGATAACTGTTTCATGCAGATTTGTACCAAATTGACAAAAGATTTACTGAGTTTTGCTGATGGTGTAGCAGATAGGAGCCAAGGGCAGAGTGGTTATTTGCCCAACATTCTCCAAGTCCTCAACGCACTGAATGACCAAATCATCCCTGCATTCAATTCACTTTTTTCTATTCAATCCAACACCTCCCTCGGGAGTGAAACAATCACCGTTGTAAATAGACTAAGGTTAGCAATCAGGGATCAGCACTTCAAGGGGTTGGAGGATTTAATCTGCTGCGACGAGAGGCCAATCCCTCGTCGTGGTAAAACCCATAAACTTACTGTTGAAGTAATGAACCGCCTCAGAGACGCCTTCCAGGATAGGGACATCCTTGAACCAATCCTCCGTGATTACCCAAAAGTCCTTGTTAGCGAGGGGATGTCTTCGGTTTCAGCCCACGTTGCGTGGATTATAGAGCTACTAGAAACCCATTTGGAAGCTAAGTCCAATATCTGTTGGGATGGTGCCTTGGGTTGTTTTTTCTTAATGACTAATTACCTCGAGGACTACCAAAGAAGCTCTTGGGATACGGTACTGGGATTTTTGAAGCTGGACAATGGTAATCTGACGGCTGAGTCAATGACAGAGAAACTTTCCTTGTTCAACGAGCACTTTTATAGAATTTGGCATGATCAGATTACGTGGTTTGACGGTGGTTTCGAGACAGAGCTACGTGAAGAAATAATAGAATCAGTGTGCAAGATCTTAGTCCCAGCATATGAAAATTTCGTTGCAGTGTTCCGTGATGTTCTTCCTGAGCATGCTGATGACTATATCTTGTATTCTGCATCGAAGTTTAATGATGCGTTCTACGGCTTCTTCAAAGGTTTCGATTGGTATTGA 1122 0.426 MILGQRERDCVDEYINSQIHFLEMCQSELRLDIFQLQQKENINEEEIIKKWIKLSSIAMRILFPNERRLCDRAFNISSISDNCFMQICTKLTKDLLSFADGVADRSQGQSGYLPNILQVLNALNDQIIPAFNSLFSIQSNTSLGSETITVVNRLRLAIRDQHFKGLEDLICCDERPIPRRGKTHKLTVEVMNRLRDAFQDRDILEPILRDYPKVLVSEGMSSVSAHVAWIIELLETHLEAKSNICWDGALGCFFLMTNYLEDYQRSSWDTVLGFLKLDNGNLTAESMTEKLSLFNEHFYRIWHDQITWFDGGFETELREEIIESVCKILVPAYENFVAVFRDVLPEHADDYILYSASKFNDAFYGFFKGFDWY* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1060 373 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 367 IPR004140 GO:0000145|GO:0006887
Amo07g1060 373 Pfam Exo70 exocyst complex subunit 49 259 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1060 373 Gene3D Exocyst complex component Exo70 1 371 - -
Amo07g1060 373 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 5 367 - -
Amo07g1060 373 SUPERFAMILY Cullin repeat-like 1 367 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1060 Amo-Chr7 20192722 20193936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1060 8 369 EXO70 exocyst subunit family AT5G58430 34.815 4.05e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1060 K07195 - adu:107458239 709.138