Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1039 ATGAACAGGATGCTTAGACCCTTGCTCAATCAAATCCATAGCTACCTAATGCAGCCACGTATATGGAGATTACTGGGTTTCGCATCAACCCTTATTGGATTCATATGCTACGCTCTCAGCTCCTCCTTCTACCAACTCTTCGGAAGTTGGACCTTGTTCAAAATCGTTGCTTATAGCATTTTCAGTATCATCATTTGTCTCACAATTTTGTTTCCAAAATTATGGCAACAATTAAGAGGCCTCAACTTTGAAGCACACATGGCCTTCTTCGTCTTGACCATCACCTCTGTCTATTCATACTTTTCCGATAAAGCGATGAAAGGGAAACCAGATGCTTATAGCGTAACATCCTATGCTGCTTTTGCCGTTACATCGCTTAGCTTGCAAAGACAGAATGCACCGGCCAAAAACCGGAATCAAAGATTCCAAGATAAGCATCATCTTGTTGTTCAAGTGAATATGAATCCGTTGCAAGTCAATAATAATATTAATAGCAATCTTGTTAGCAGTAATATCCCTCAAAAAGCTCAGCAGCCGGATGAACACGTGGCTGTCGAAGCGAATATCTTGCCGAGCATGGAGGAGCGTAGATGGGCTAATTTGGCTGTTGTGAACATGCTTAAGTGTAATTTGAACAAATACATTCAAGATAAGGTTCACCGGATTCCAGAGATACTAATCAATGATCATAACTTCCTGATTGACGAGCTTCCATCACAATTAGTTAGTGACCTTCATGAAAAAGTGAAGTTCATGGTCCGAACCGGGTTCGAGAAGGAGTGTGTGGACCAATACTGCACTTGGAGGAGAGAGTTCTTAGATTTGGCGGGGAAGGAGCTTAGTATACAAGAAATCGAAGAGAAGAGAAGGATTAAGACTTGGATTAAAGTTTCCAATGTTTCACTCAAGATATTGTTTCCTAATGAAAGGAGACTCTGCGATCGCATCTTCTTGGGTTTTCCTTCTGTCGCTGATTGTTCTTTCGCGCAGATTTGCGGAGAATTCACCACTAATCTGCTAGATTTTGCCAATGGTTTTGCCAATGGTAGCCATATGCTTAATCTTTTGCCCAGTGTCCTCCAAGTGTTCGGTGTATTGCATGAACTGATACCAGAGTTTGAGTCAGTGTTTTTGGACCAATTCAGTGTATCGCTTAGGAGTGAAGCAGCGACGACTGGAAGGAGACTAAGGAAAGCAATCAACGGGATGTTCATGCAGCTTGAGAAGTTGATAAATTGTGATACATCACAAGTAGCTTGTCCTGGAGGTATTTGCCCTGTTACCGTGGAAGTGATGAACCATCTTAGTGCTGTTGGAGAGTTTGGGTCTTCTTGGCTTTCTGCGGAGGTAACTAGAATAATTGCATTGTTGGAAAGCCATCTGGAAGCCAAGTCCAAAGATTACAGCAACCCTGCTTTGGGCTTTGTTTTCTTGATGAATAATGAGAGGTACATTGAAAAGAAGGCAAAACAGTATCAATTGGATAAGATTTTGGGTAATCATTGGATCCGACAAAGGGCTGCTAAAGTCCGAGAAAACTCTGAACACTACAGGAGAAGCTCGTGGGAAGTGGTCTTGGGGTTTTTGAAACTTAGCACAGAGCAAATTGAAGAAGCAGAGTCCATGAAGAAGAAGCTCAATCTGTTCAACTTGCGGTTTAAGGAGATATGGATGGATCAAAGTGCATGGTTTATGCATGATGAAGAGCTAAGGGAAGAGATGATAGCATCGCTGAGAAAGATATTGTCTCGTACCTATGGATTGTTCATTTGGAGTTTCAACAACTTACTTGGTAAGGATGCTCATGAGTGTATCAGGTATTCAGTGTTAGACATTGAAGACCTACTGAAGGATTTATTTGGCTGGAGAGGTGAACAACTAGCAGAAATGAAAGATTAA 1899 0.4165 MNRMLRPLLNQIHSYLMQPRIWRLLGFASTLIGFICYALSSSFYQLFGSWTLFKIVAYSIFSIIICLTILFPKLWQQLRGLNFEAHMAFFVLTITSVYSYFSDKAMKGKPDAYSVTSYAAFAVTSLSLQRQNAPAKNRNQRFQDKHHLVVQVNMNPLQVNNNINSNLVSSNIPQKAQQPDEHVAVEANILPSMEERRWANLAVVNMLKCNLNKYIQDKVHRIPEILINDHNFLIDELPSQLVSDLHEKVKFMVRTGFEKECVDQYCTWRREFLDLAGKELSIQEIEEKRRIKTWIKVSNVSLKILFPNERRLCDRIFLGFPSVADCSFAQICGEFTTNLLDFANGFANGSHMLNLLPSVLQVFGVLHELIPEFESVFLDQFSVSLRSEAATTGRRLRKAINGMFMQLEKLINCDTSQVACPGGICPVTVEVMNHLSAVGEFGSSWLSAEVTRIIALLESHLEAKSKDYSNPALGFVFLMNNERYIEKKAKQYQLDKILGNHWIRQRAAKVRENSEHYRRSSWEVVLGFLKLSTEQIEEAESMKKKLNLFNLRFKEIWMDQSAWFMHDEELREEMIASLRKILSRTYGLFIWSFNNLLGKDAHECIRYSVLDIEDLLKDLFGWRGEQLAEMKD* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1039 632 Pfam Exo70 exocyst complex subunit 442 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1039 632 PANTHER PROTEIN, PUTATIVE-RELATED 16 620 - -
Amo07g1039 632 Gene3D Exocyst complex component Exo70 200 626 - -
Amo07g1039 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 620 IPR004140 GO:0000145|GO:0006887
Amo07g1039 632 SUPERFAMILY Cullin repeat-like 223 620 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1039 Amo-Chr7 19443105 19445503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1039 227 620 EXO70 exocyst subunit family AT5G58430 44.159 5.44e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1039 - K07195 adu:107458262 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0805 17 19090767 19093056 Amo07g1039 07 19443105 19445503 hybridization