Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1038 CGAAAGTTCAACAATACCTTGAGTTATATCACAGAAGCTCATGGAGTAAGGTTTCTGGAATTTCTGAACTTGGATAACATTGAGTCACTGGCTCTTAATATTGTTGCTAAGTCAATGAAAGAGAAGCTTAGTTCCTTCACTGCGCAGAATATGACACCTCTATCTGTCCCAATTCCAAGTTGGCTTATGCACCAAATGCTATGGAGATTCCTTGGTTTTGCTTCATCCATAGTTGGATTACTCTGTTACGCTCTTAGTAGATCCTTCAACTTTCTATTCGGAAAATGGAACTTGGCGAAAATCTCTATTTACATTGTTTTCAGTCTTATAATCTGCCTTGCCACTTTCTTTGCCAAGATATGGCAACACTCTGCAAGTCTCCGATTGAGAGCTCATATGACATTTTTAGTTCTGACCGTTACTTCTGTTTACTCATTCTTTTTCGATAAAGCTGCGAATGGGGATCCGGATGCATATAGCATAGGTTCTTCTGCTTCTTTTGCTATAATGTGGTTTAGTTTGTCAAGACAAATTCATTGTGGATTTGAGGTAGACATGTTATATTTCTTTCTGGGAGTTCTCATAATACAACTGATGAAGATAAGATTCTTGTTGAGTATAGTTGCGATATGTTTCAGCTATTTCCTCATCATTCTTCGATCCTCTCTAGATGCATCAACAGTCACAGATAGTGAATATTTGGAACTCCATGACCAAAATCATGTGTCAATTCAAGTGGAATCTGATTCACAACAATCCAACATTCATAGAATCATCATGACAAAGCTCATGGATTGTGTTGAGGCGCTTCAGAAGAGAAAAGCTGCACTAGTGCAAACCATTTTTGAGGAATACAATAATGCTACTAATAACACTATGTTGGTGACTGATTACAATTTCTTGATTGATACGCTACCACAGGGAGTTGTAAATGACCTTCATGAAGCTGTCAAATCTGCAGTGGCTTTTGGATTGGTGAAGGAATGCTCTGATGCCTACATCGATTGCTGGAGGGAATTCTTGGAGGAGTGTCTAGCAATATTGTTGGAGTTGGACACTGTCAAGATTGACCACCCTAACACACTACCAACTCCATATTTCATGGTTAAGAGATGGGCTGAAACTTGCAATGTTGCATTCAAAATACTGTTTCCATTCGAAAGACGACTCTGCGATCGTGTCTTCTTTGGGCTACGCTCAGTTTCTGATGTTTGTTTTGCAAATATTTGCCGGGAATCCACGACTCAGCTGTTAAATTTTGCTGATGCCTTTACAAGTGTGAGCTGTTCATTTGATCAAATATTCATCATTGTTCACATTTTTCCGGCATTGTGTGACCTGATTCCACACTTGCAGACATTGTTTTGTGATAGCCTCACTATGTTCTTGGTGAACGAAGCTATTACAATCCAGAACAACTTGAGAGAAGCAATAGAGGGTCGTTACACGGAGGTGAAGAATATGATTTTCCGTAGTAAGAAGGCTAAGTTTGTTTTTCCCAATGGCGGAATTCATCCATTAACAATGGATGTCCTGGCATATGTCGAGTTATTTTGCGAGCCATTTTTACAAAAATATGTGCAGGGTTCTGATAGAGCTGGAACATCGTTTTCATTCTCTGTGGAGATGGTTTCTATGTTGAAGATTTTAGAGAGAAAACTGAGAATTAAATCCAAGAACTACAAGGATCCTGCTTTGTGCTATTTCTTCATGATGATTAATAGAAGGTACATACAAAACTTTGTAAAGCGACGGCATTTCGTAACCCATTTGTGCAATGATTGGGTCCAAAATAATACACACAAAGCTGAGGAAAACCTTGAGCTCTATTACAAAAGCTCATGGAACATGGTGGTTGATTATCTGAAGCTGTACAACGATGAGAAGATATGCACTCTTCAATCTACATGGTTTGTTGGTAAAGAGCAACTTAGGAAAGAAATAATAACATCCGTAGAGAACATGTTGCTTCCAGCATATGGAAACTTCATTGGGAAGTTCCATAATGTTCTTGCTGCAGATGCATATGAGTATATAGAGTACGGAATGTTTGATATACAAGCTCGACTTAACGGTTTATTTAGAGGAAAGGATATGGTACCAGTGTCTGTCCGAATTCCAAGATGGCTTATGCATCCAAAGCTAAGGAGATTCGTTGGTGTGGTTTCATCCATAGTTGGACTGCTCTGTTATGCTCTCAGTACATCCTTCAATTTTCTATTCGGAAAATGGAACTTGGTGAAAATCTCTATTTACATTGTTTTCAGTTTTATAATCTGCCTTGCCACTTACTTTCCCAAGGTATGGCAACACTCGGCTTGTCTCCGGTTTCGAGCGCATATAGCATTTTTAGTTCTGACTATTACTTCTATTTACTCATTCTTTTTTGACAAAGCTTCTCTTATAGTCTCTTATGCTGCTTTTGCTATAATGTGCTCTAGTTTTCCAAGACAGATCCACGGCGGATTTGAAGTGGATCTGCTATATTTCTTTCTCGGAGTTTTTATTGTGCAACTGATGAAGATAAAAATATTGTTTGGTATTACTGGGGTCTGTTTCAGTTATTTTGTTATTATTCTTAGATCTTCTCTAAACCTCACATTAGAAGATGAACATTTTGATCCGTGTGATCAAAATCAAGTTGTCGTTCAAGTTGATTCGCAACAAGCCAATGATGATTGCAGTTTTATGATGGCACGGTTAAGTGCTTGTATAGAAAGACATCAGCGGAGAAGCTATGGTATCATGGACAAAATTTTGGAGCAAGTGAGGGAATACGGTGAAGCCATTGATGTCCCTGGAAAGGTGATTGACCACAACTTGGTGTTTGATGCACTTGGGCCCGGAGCTATGGAGGATCTTCATGATGTTGCCAAGTCCACCATGGCTGCTGGTTTCGAAAAGGAGTTCTCCCATGCATATAGCAATTGCAGGAGGCAATGGTTAGAGATGTGCATATTGAGATTGTTGAAGCTTCGAGAGGATAGAGTTATTGACCCTCAAACAATGCCATCCATGGATTACATTATCAGTAGATGGATCATAGCTTCTGATGTTGCCCTAAGGATACTATTTCCCTCGGAAAGGCAAATCTGCAGTCGTGTCTTCTCTGGTTTACACTCTGCAGCGGATGCTTGCTTTGGACAAATTTGCTCTGAAGCAACAATTCAGCTGCTGAAATTCGCAGAGGCCTTCGTGGCTATTAGCCTTCCAACATGTCGGATGTTCCAAACCTTCCGCGTTTTTCTTGCATTGAACCAACTGATTCCAGACTTCCAGACATTGTTTTCTGATGGCCCCAGCATGTTCTTGGTGAATGAAGCTGTCACAACCCGGAACAAATTGAGAGAAGCAATCACAGGCTCTTACATGGATATGAAGAATTTGATTTTCCGTAGCAAGGAGGCTAAGTTAGTTCTTCCAAGTGGTGGGGTTCATCTAATTACCTACAATGTAATGACATATATCCTATTCTCACGGCAGTCGCAAAGGAAGCTTCAGCAGGCTTCGCTAGAATACCCGATGGATGCCGGAACCCAATCGAATAATATTTTGTTGTTGCAGTTATTAGAGAGAAAATTGAGAACCAACTCCAAGAAGTACAAGGACCCTGCTTTGGGCTATTTTTTCATGGTGAATAATAGGAGTTACATAGAAAACAAGGTAAAAGAGTGGGAGTTGGGAACCTTTTTGGGAGATCATTGGGGTCAAAATAACACTGCAAAAGTGAAGCAAAACCTTGAGCTATATTACAGAAGTTCTTGGAACAAGTTGCTAGACTATCTGAATCTAGACTACTATGGCGAGTCGCCGGCACCTGAGGTTGCCGCAGAGCCAATGAAGAATAAGCTGCTGTTGTTCAACATTCATTTCATGGAGACATGCGTTGCTCAATCTACATGGTCCGTCTTTGATGAGCAGCTAAGGGAAGAAATTAGGACTTCAATAAAAAACATGTTGCTGCCAGCATATGGAAACTTCATTGGGACGATGCGTAAAGTTCTTGGAATGAATGCTTATGAGTATATTAAGTATAGAATGTTTGACATTGAAGCTCGAATCGACGGTTTATTTTATGGAAGTATCATGAATCAATGA 4098 0.3982 RKFNNTLSYITEAHGVRFLEFLNLDNIESLALNIVAKSMKEKLSSFTAQNMTPLSVPIPSWLMHQMLWRFLGFASSIVGLLCYALSRSFNFLFGKWNLAKISIYIVFSLIICLATFFAKIWQHSASLRLRAHMTFLVLTVTSVYSFFFDKAANGDPDAYSIGSSASFAIMWFSLSRQIHCGFEVDMLYFFLGVLIIQLMKIRFLLSIVAICFSYFLIILRSSLDASTVTDSEYLELHDQNHVSIQVESDSQQSNIHRIIMTKLMDCVEALQKRKAALVQTIFEEYNNATNNTMLVTDYNFLIDTLPQGVVNDLHEAVKSAVAFGLVKECSDAYIDCWREFLEECLAILLELDTVKIDHPNTLPTPYFMVKRWAETCNVAFKILFPFERRLCDRVFFGLRSVSDVCFANICRESTTQLLNFADAFTSVSCSFDQIFIIVHIFPALCDLIPHLQTLFCDSLTMFLVNEAITIQNNLREAIEGRYTEVKNMIFRSKKAKFVFPNGGIHPLTMDVLAYVELFCEPFLQKYVQGSDRAGTSFSFSVEMVSMLKILERKLRIKSKNYKDPALCYFFMMINRRYIQNFVKRRHFVTHLCNDWVQNNTHKAEENLELYYKSSWNMVVDYLKLYNDEKICTLQSTWFVGKEQLRKEIITSVENMLLPAYGNFIGKFHNVLAADAYEYIEYGMFDIQARLNGLFRGKDMVPVSVRIPRWLMHPKLRRFVGVVSSIVGLLCYALSTSFNFLFGKWNLVKISIYIVFSFIICLATYFPKVWQHSACLRFRAHIAFLVLTITSIYSFFFDKASLIVSYAAFAIMCSSFPRQIHGGFEVDLLYFFLGVFIVQLMKIKILFGITGVCFSYFVIILRSSLNLTLEDEHFDPCDQNQVVVQVDSQQANDDCSFMMARLSACIERHQRRSYGIMDKILEQVREYGEAIDVPGKVIDHNLVFDALGPGAMEDLHDVAKSTMAAGFEKEFSHAYSNCRRQWLEMCILRLLKLREDRVIDPQTMPSMDYIISRWIIASDVALRILFPSERQICSRVFSGLHSAADACFGQICSEATIQLLKFAEAFVAISLPTCRMFQTFRVFLALNQLIPDFQTLFSDGPSMFLVNEAVTTRNKLREAITGSYMDMKNLIFRSKEAKLVLPSGGVHLITYNVMTYILFSRQSQRKLQQASLEYPMDAGTQSNNILLLQLLERKLRTNSKKYKDPALGYFFMVNNRSYIENKVKEWELGTFLGDHWGQNNTAKVKQNLELYYRSSWNKLLDYLNLDYYGESPAPEVAAEPMKNKLLLFNIHFMETCVAQSTWSVFDEQLREEIRTSIKNMLLPAYGNFIGTMRKVLGMNAYEYIKYRMFDIEARIDGLFYGSIMNQ* 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1038 1365 Gene3D Exocyst complex component Exo70 223 700 - -
Amo07g1038 1365 Gene3D Exocyst complex component Exo70 872 1365 - -
Amo07g1038 1365 PANTHER EXOCYST COMPLEX PROTEIN EXO70 708 1358 IPR004140 GO:0000145|GO:0006887
Amo07g1038 1365 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 695 IPR004140 GO:0000145|GO:0006887
Amo07g1038 1365 SUPERFAMILY Cullin repeat-like 935 1358 IPR016159 -
Amo07g1038 1365 Pfam Exo70 exocyst complex subunit 370 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1038 1365 Pfam Exo70 exocyst complex subunit 628 691 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1038 1365 Pfam Exo70 exocyst complex subunit 1011 1355 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1038 1365 PANTHER PROTEIN, PUTATIVE-RELATED 708 1358 - -
Amo07g1038 1365 PANTHER PROTEIN, PUTATIVE-RELATED 60 695 - -
Amo07g1038 1365 SUPERFAMILY Cullin repeat-like 288 694 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1038 Amo-Chr7 19418997 19424265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1038 295 696 EXO70 exocyst subunit family AT5G58430 39.815 1.21e-92 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1038 - - adu:107458221 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0806 17 19093584 19095811 Amo07g1038 07 19418997 19424265 hybridization