Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1037 ATGGCTGAGAACAACGGGGAAGAGAAATTACTCGCTGTGGCGCGACACATAGCTAAGACGCTGGGCCACAACACCAACATGGCTGATGATATACTCCAAATATTCTCGAATTTCGATGGAAGGTTCTCGAAGGAGAATTTAGCAGACAAGGTTGCAGATGGTGATCCCAGGGCCTGCGCCGCACTTGATCATTCCCTGAAGTCCCTTGACCATCGGATCTCACAGTTTGTGTCATCCGACCGTCCGATCTGGGCCGACTCAGCCGACGCTGTTGCTTTTCTTGATGCCGTTGACGAGCTCGTCGCCGCCGTCGCCGAGTGGTCGCAGCTCTCAACAGACAAGGCTTTTGGCGCGTGCCTCGCACGTGCCGAGGACATGCTGCAGCACGCCATGTTCCGACTCGAGGACGAGTTCCGGTCGCTCATGGAACGCGCTGGAGAGTCGTTTGACCTGACTCCGCCGTACCGAAACGGCGTCGAGTCGGTGGAGAATATTCCATTCGATTCGGAGGAAGAGGAGAACGAGCTGGAGACGGCGGTGAACGACGGAGCAGAAGAGGATCAGATCCCGGTGGCGCTGCCGGTAACGGACTACGACATCGTAATCGACGCGCTCCCCGCGGGGACGATCAACGACCTGCACGAGATCGCGCGGCGCATGGTGGCCGGAGGTTTTGGGAAAGAGTGCTCGCACGTATACAGCAGTTGCAGGAGGGAGTTCTTGGAGGAGAGTCTCTCACGATTAGGGTTACAGAAGCTGAGCATCGAGGAGGTTCACAAGATGCCATGGCAGGACCTCGAGGACGAGATCGAGAGGTGGATTAAGGCCTCCAACGTCTCCCTCAAGATCCTGTTCCCGAGTGAACGAAGATTATGCGACCGTGTGTTCTTTGGATTCTCCGCCGCTGCTGACCTCTCCTTCATGGAGGTTTGCCGCGGATCTACAATTCAGCTTCTGAATTTCGCGGACGCTGTCGCTATCGGGAGCCGCTCGCCTGAGCGGCTGTTTAGGATCCTCGACGTGTTTGAAACTTTGCGTGACCTCATTCCGGAATTTGAAGCCCTGTTCTCGGATCAGTACAGCGTTTCGCTCAGGAACGAAGCAATTACTATTTGGAAGAGGTTGGGGGAAGCAATTAGGGGAATTTTCATGGAGCTGGAGAATCTAATTCGCCGCGATCCTGCTAAGGTTGGGGTTCCCGGTGGGGGCCTACATCCAATCACACGCTACGTGATGAACTACCTACGCGCTGCTTGCCGGTCACGGCAAACATTGGAGCAAGTTTTTGAAGACTATGGACATCCGTTGAAGGATTACCCTAAGCTTGATGATAGAGTCGCACCCAATTCTTCACTCTCTGTGCAAATGGATTGGATAATGGAGCTGTTGGAGAGCAATTTGGAGGCGAAGTCCAAAATCTACAATGATCCTGCATTGTGCTATGTCTTCTTGATGAACAATGGGAGGTACATTGTTCAGAAGGCCAAAGATAGTGAATTGGGAACTCTCTTGGGCGACGATTGGATCCGAAAACACACTGCAAAAGTTAGGCAGTACCATGTGCAATACCAGAGGAGTTCGTGGAACAAAGTTCTGGGGATTTTAAAGCTTGATGGTAGTAGTAACGGGTCATTGGGGCCTAATGGTGCAGCAAAGTCAATGAAAGAGAAACTGAAAATGTTCAACACACAGTTTGAGAATTTATGCAGGGTTCAGTCTTCTTGGTTTGTTTTCGATGAGCAGCTTAGGGAAGAAATAAGAATTGCCCTTGAGAAGATCTTGTTGCCTGCGTACGGAAGCTTCATTGGAAGGTTCCATACGGAGCTTGGCAAGAATGCTGATAAGTATGTTAAGTATGGAGTAGAGGACATTGAAGTAAAGCTCAACGATTTATTTCAGGGTAGCAGTGGATCAACTGGTAGCCGAAAGTGA 1932 0.514 MAENNGEEKLLAVARHIAKTLGHNTNMADDILQIFSNFDGRFSKENLADKVADGDPRACAALDHSLKSLDHRISQFVSSDRPIWADSADAVAFLDAVDELVAAVAEWSQLSTDKAFGACLARAEDMLQHAMFRLEDEFRSLMERAGESFDLTPPYRNGVESVENIPFDSEEEENELETAVNDGAEEDQIPVALPVTDYDIVIDALPAGTINDLHEIARRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEEVHKMPWQDLEDEIERWIKASNVSLKILFPSERRLCDRVFFGFSAAADLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKVGVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKDYPKLDDRVAPNSSLSVQMDWIMELLESNLEAKSKIYNDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHTAKVRQYHVQYQRSSWNKVLGILKLDGSSNGSLGPNGAAKSMKEKLKMFNTQFENLCRVQSSWFVFDEQLREEIRIALEKILLPAYGSFIGRFHTELGKNADKYVKYGVEDIEVKLNDLFQGSSGSTGSRK* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1037 643 Pfam Exo70 exocyst complex subunit 271 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g1037 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 633 IPR004140 GO:0000145|GO:0006887
Amo07g1037 643 Gene3D Exocyst complex component Exo70 83 642 - -
Amo07g1037 643 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 633 - -
Amo07g1037 643 SUPERFAMILY Cullin repeat-like 84 632 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1037 Amo-Chr7 19415028 19417682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1037 1 636 EXO70 exocyst subunit family AT5G58430 70.736 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1037 K07195 - gmx:100803694 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0807 17 19098980 19101482 Amo07g1037 07 19415028 19417682 hybridization