Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1015 ATGAGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAAGAAGTGCCAGAAGCTACTTTCTCCTCCTCCATATTACCCTTTTCCAATAACCACCAACTACTATACCATGATAATGATGATGAAGAATTCAGTATCTTGGAGCAACTTGAAGGAGTCTTGGACGTTGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTTACCATCTCCACAGCAGGGAATGGTAACTAGTTGTAGTGGCGATGATGAAGAGCTTCGTTGGGATTTCATGGAATGGGAGGAGGATCATCATCGATTCCCAGAAGCAGAAAATGAATTGAAGGTAGTAAGCAATAATAACAAGTGCCTAATGGAGGAGGAGGTGAAGAAAATGGTAGTAAAGAGGGAAGAAGAAAGTAATAACAATAATGTTGGGTTTTGGGAAGTGGAAGATGAAAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTTTGGGCTGATGACTACTCACTTTCATTGGCAACCACCAACAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAAAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 741 0.4062 MRYTSLLRSPKKEEEQEVPEATFSSSILPFSNNHQLLYHDNDDEEFSILEQLEGVLDVEEEEEEEQKLLPSPQQGMVTSCSGDDEELRWDFMEWEEDHHRFPEAENELKVVSNNNKCLMEEEVKKMVVKREEESNNNNVGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLATTNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1015 246 MobiDBLite consensus disorder prediction 1 19 - -
Amo07g1015 246 PANTHER CCT MOTIF FAMILY PROTEIN 1 246 - -
Amo07g1015 246 Coils Coil 49 69 - -
Amo07g1015 246 MobiDBLite consensus disorder prediction 1 25 - -
Amo07g1015 246 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 246 - -
Amo07g1015 246 Pfam CCT motif 203 245 IPR010402 GO:0005515
Amo07g1015 246 ProSiteProfiles CCT domain profile. 203 245 IPR010402 GO:0005515
Amo07g1015 246 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1015 Amo-Chr7 18931792 18933444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1015 145 245 C2C2-CO-like Transcription Factor Family AT1G25440 44.915 1.17e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo07g1015 CCT 2.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1015 - - aip:107608058 462.225