Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1013 ATGGGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAAGAAGTGCCAGAAGCTACTTTCTCCTCCTCCATATTACCCTTTTCCAATAACCACCAACTACTATACCACGATAATGATGATGAAGAATTCAGTATCTTGGAGCAACTTGAAGGAGTCTTGGACATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTTACCATCTCCACAGCAGGGAATGGTAACTAGTTGTAGTGGCGATGATGAAGAGCTTCATTGGGATTTCATGGAATGGGAGGAGGATCATCATCAATTCCCAGAAGCAGAAAATGAATTGAAGGTAGTAGTAAGAGATGATAGCAGAATAAGCAATAATAACAAGTGCCTAATGGAGGAGGAGGTGAAGAAGATGGTAGTAAAGAGGGAAGAAGAAAGTAATAACAATAATATTTTTGGGTTTTGGGAAGTGGAAGATGAAAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTCTGGGCTGATGACTACTCACTTTCATTGGCAACCACCAACAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAAAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 774 0.4031 MGYTSLLRSPKKEEEQEVPEATFSSSILPFSNNHQLLYHDNDDEEFSILEQLEGVLDIEEEEEEEEEEQKLLPSPQQGMVTSCSGDDEELHWDFMEWEEDHHQFPEAENELKVVVRDDSRISNNNKCLMEEEVKKMVVKREEESNNNNIFGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLATTNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1013 257 Coils Coil 49 69 - -
Amo07g1013 257 Pfam CCT motif 214 256 IPR010402 GO:0005515
Amo07g1013 257 MobiDBLite consensus disorder prediction 1 26 - -
Amo07g1013 257 PANTHER CCT MOTIF FAMILY PROTEIN 3 257 - -
Amo07g1013 257 ProSiteProfiles CCT domain profile. 214 256 IPR010402 GO:0005515
Amo07g1013 257 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 257 - -
Amo07g1013 257 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1013 Amo-Chr7 18910375 18912229 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1013 158 256 C2C2-CO-like Transcription Factor Family AT1G73870 44.828 1.34e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo07g1013 CCT 2.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1013 - - aip:107608058 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0832 17 19683345 19685102 Amo07g1013 07 18910375 18912229 hybridization