Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1005 ATGTCGGAGTCGGAGGTTGTTTGCGTCACCGGCGGAAGCGGTTGTATTGGTTCGTGGCTTGTCCACCTCCTCCTCACTCGAGGCTACACCGTTCATGCCACCGTCAAAGATCTCAAGGATGATACTGAGACGAAGCATCTAGAAGCTCTCGAAGGAGCGTCCACGCGCCTCCGTCTCTTTCAAATCGACCTGCTCCAGTACGAGACCATCGTCGCCGCCGTGCGCGGATGCTCCGGCGTCTTCCACCTCGCTTCACCCTGCATTGTCGACGAAGTCCATGACCCACAGAAGGAGCTTCTGGACCCTGCAATTAGAGGGACAATGAATGTCCTTGAGGCAGCAAAGGAAGCAGGGGTGAAGCGTGTAGTGGTCACGTCGTCTGTCTCGGCGATTACGCCGAGCCCAGGTTGGCCATCTGATGTTGTCAAGACAGAAGATTGTTGGACTGACACTGAATACTGCAAGCAAAAGGGGCTGTGGTATCCGCTATCCAAGACTTTAGCTGAGAAAGCTGCTTGGGATTTTGCAAAGGAGAAAGACTTGGATGTTGTGGTGGTGAATCCCGGAACTGTGATGGGACCTGTTATTTCACCCAGACTTAATGCTAGTATGATCATGCTTGTTCGCCTTCTTGAAGGGTGTGATGAAACATATGAGAACTTTTTTATGGGATCAGTCCACTTTAAGGATGTAGCTTTAGCACATATTATGGTGTATGAGAACAAAACAGCAACCGGTAGGCATTTGTGTGTAGAAGCCATCTCTCACTATGGCGACTTTGTGGCGAAAGTTGCGGAGCTTTATCCACAGTACAATGTGCCTAAGTTAAAAACTGATTGTACTAAGAAGCTAGATCCCAAGAGATACCCAACCAGGATTATTGAGGGCAAAGGATGGATCGAAGAAACTTATGGATCTGGGTTTGGAATTTATTCCCATGGAGAAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAGCAAAGGGATACATTTGCCAAGTTTATCTGA 1008 0.4831 MSESEVVCVTGGSGCIGSWLVHLLLTRGYTVHATVKDLKDDTETKHLEALEGASTRLRLFQIDLLQYETIVAAVRGCSGVFHLASPCIVDEVHDPQKELLDPAIRGTMNVLEAAKEAGVKRVVVTSSVSAITPSPGWPSDVVKTEDCWTDTEYCKQKGLWYPLSKTLAEKAAWDFAKEKDLDVVVVNPGTVMGPVISPRLNASMIMLVRLLEGCDETYENFFMGSVHFKDVALAHIMVYENKTATGRHLCVEAISHYGDFVAKVAELYPQYNVPKLKTDCTKKLDPKRYPTRIIEGKGWIEETYGSGFGIYSHGENYQGCCREFEEQRDTFAKFI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1005 335 CDD FR_SDR_e 7 284 - -
Amo07g1005 335 Pfam NAD dependent epimerase/dehydratase family 7 241 IPR001509 -
Amo07g1005 335 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 5 279 - -
Amo07g1005 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 279 IPR036291 -
Amo07g1005 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 279 - -
Amo07g1005 335 Gene3D - 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1005 Amo-Chr7 18773273 18775852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1005 3 276 Monolignol Biosynthesis Gene Families AT5G58490 79.927 4.54e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1005 - - adu:107458329 563.533