Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0993 ATGTCCAATATTCGGAAGCACTACGATTCGTTGCCACTCAGCTATGCACAAGCTGATTTTGATATGAAGGATGTGTTTCTTCACATCAAGCTGATGGAACAAGCATCAGCCAGTGACTACCCTGCCATCCTGATTCAAGAGGAGAGTGATGATGATGGTGGTGGTTGTGATGTAGTTAAAGGGTCTGTGTTGAAGCTCACTTTTGCTTGCAACTCTCCGATCTCGTGGCCTGCAATGTCTAGTGCATTGGACAGTTCATCCATTTCCTGCAAGAAAGTTCAGATCTTTGAGAAGAAAAGTTTCACAATTGGGATTGTTCTCCTTGTTGTTCAGCAAGGTCAAGAGAAGCTGGTGAGGACCCGGGTCGAAAATGCTCTCAGATTTGCGATGAAGAAGTCAAAAACCAGTGCTGTGAAGCTCCCCTTTGGGCTCTGTGGRTGCCAGGAAGAGATCTCAAAAGGGAGATCAGAGCGTGGAGAAATTGAAGAAGATGGTGRTGGWGATGCATCATCATGCTATGTGATGAGGGAGTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGGTTCCATTGCCTAGTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACAATAAAATCAGGYTGTAATGAGATTGAGAAATGGGTGTTGAATTCAGATAATGTTGAGTTTTTGGACCAGATTGGACCAAATTCCTATAAAGGTTTCTACAATGGGAAAAGGGTTGGCATTGAAAAACTCAAGGGGTGTGACAAAGGGAATGCTTATGAGTTTGAGCTCCGAAAAGATCTTCTTGAACTTATGACTTGTGGCCACAGAAACATTCTTCAGTTTGTTGGTATCTGTGTGGATGATAATCATGGTTTGTGTGTAGTTACCAAGTTCATGGAAGGTGGTTCTGTKCATGACTTGTTGCTGAAGAACAAGAAGATTCATGCTAAGGATATTGTGAGAATTGCAGTTGATATAGCTGAAGGAATCAAGTTCATGAATGATCATGGTGTTGCTTATAGGGACCTTAATTCACAGAGGATCCTGTTGGATAGACATGGGAATGCATGCTTGGGAGACATGGGAATAGTCACTGCTTGCAAGAGTGTTGGTGAAGCAATGGAGTATGAAACTGATGGATACCGGTGGCTAGCTCCTGAGATAATTGCCGGGGATCCTGAGAGTGTGACAGAGACATCGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCATATTCAGCATTCTCACCTGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTTAGACCTGAAATCCCMAAAGACTGTCCACAAACACTMAAATCAATCATGACAAAGTGCTGGAACAATATCCCTTCGAAACGCCCTCAATTCTCCGAGATCTTAACATTGTTGCTGCGTCCAAATAACATCAATAGGTAA 1446 0.4295 MSNIRKHYDSLPLSYAQADFDMKDVFLHIKLMEQASASDYPAILIQEESDDDGGGCDVVKGSVLKLTFACNSPISWPAMSSALDSSSISCKKVQIFEKKSFTIGIVLLVVQQGQEKLVRTRVENALRFAMKKSKTSAVKLPFGLCGCQEEISKGRSERGEIEEDGXGDASSCYVMREFENSSQKIQLQVPLPSSSFVVSVDEWQTIKSGCNEIEKWVLNSDNVEFLDQIGPNSYKGFYNGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHRNILQFVGICVDDNHGLCVVTKFMEGGSVHDLLLKNKKIHAKDIVRIAVDIAEGIKFMNDHGVAYRDLNSQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETSMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSIMTKCWNNIPSKRPQFSEILTLLLRPNNINR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0993 481 Gene3D Transferase(Phosphotransferase) domain 1 216 477 - -
Amo07g0993 481 PRINTS Tyrosine kinase catalytic domain signature 294 307 IPR001245 GO:0004672|GO:0006468
Amo07g0993 481 PRINTS Tyrosine kinase catalytic domain signature 330 348 IPR001245 GO:0004672|GO:0006468
Amo07g0993 481 PRINTS Tyrosine kinase catalytic domain signature 400 422 IPR001245 GO:0004672|GO:0006468
Amo07g0993 481 PRINTS Tyrosine kinase catalytic domain signature 444 466 IPR001245 GO:0004672|GO:0006468
Amo07g0993 481 SUPERFAMILY Protein kinase-like (PK-like) 198 472 IPR011009 -
Amo07g0993 481 ProSiteProfiles Protein kinase domain profile. 223 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0993 481 PANTHER SERINE-THREONINE PROTEIN KINASE 1 477 - -
Amo07g0993 481 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 477 - -
Amo07g0993 481 Pfam Protein tyrosine and serine/threonine kinase 260 472 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0993 Amo-Chr7 18449287 18454276 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0993 162 473 MAP Kinase Kinase Kinase AT2G17700 30.435 1.53e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Amo07g0993 PK_Tyr_Ser-Thr 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0993 - - adu:107458330 931.784