Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0981 ATGGTACTTCAAGATATTAAGGGAGGAAGGATCCAAGCGTCAATCAATAAAGGTTTATTCAAGAAGTGGAGGGGTTTTTTTGAGGAGTTTAAAATGTACACTATGAGTAACTTCATAGTTGTGGACAAGATGGAGAAGATTAAAACAACAAGAAATCGGTGGACTTTGAACTTTTCCCACAGAACAGTTGTGGTTCGTGTGGAAAATCCAAGTTTTTCTCTCGAACCCTTCTGCTTGAAGCCTATCCCAGAGCTCCTTGCTGCCGAAAAGCTTGATGATTCTCAACTATTGGACATAATCGGGGAGGTTGTTGGGAAGGAGGACCCAAGGGATATAATCACAAGCAAAGGAAAGGAAACAAAACGTATGGTGGTTGTGATAGTAGACCTAGATAACAACAATCTTGATTGTGTGTTATTTGGTGACATGGTCGATCAAATAGTTCCCCATCTTGAAGATGGCAGGGTTGAACCACTGATAGTGGTGTTGCAGTTCTTTAAACCTAGCCGATGGAATGATAAGGTATCGGTTCAGAGCCACTTTGATGTCTCTAAAATACATGTTAATCCTGACATGAAGGAAGTATCCGGTCATGGTGTGCAATCTGGTGCTGCAGAACTGAAAAGAGGAGGTGTCGTAGTGAAATCAATAGAGGACGCACTCAATTCAACAGAGGAAGGTCCTATATGGATTGGCGGAACCATTGTCTCTATCAATGCTGGCAACAACGATTGGTTTTACAAATCGTGTAGGAAGTGTCCAAAGAAAGTAGAAACCCCAATTGGAAATCGATATGAATGTTCCAAGTGTGGTCACACACATGGCAGTGCATCCCTTAGGTACAAGGTTGAAGTTATGGCCTATGATGGAACAGGAAGTATAACTATGCTAATGTGGGATAGAGAAACAACACAGCTTATAGGGAGGCAAGCTAAACAAATCAAGGATGAAGATTGTTTGGAAGGGGAAGGTTACCCCCCAACTCTTGATAACATGATGGATAAAAAGTTACTCTTTAAAATTAATGTCAAAACAGCCAACATCAACAAGCATGACCAGGTTTACACTATCATGAAGATATGTGACGATGAAGACATTGTAGAAAAAAATTGCCCTATGGAATTCATCAGCAATCCTTCTGACGTCTTAACTGAGAATGGGATCAGCAATTCAATGGATGTTTCAGCAACTGTGGCTAATCTCAAGTCTGATAATAATTCTCAGTGCTCTGTGGATGTTGTGGAGGATTCTGTCACAAGCCTCAAGTGCAAGATCCCAACTAGGAGAGCTCTCAATGGGGTAAAACATGCAGTGTCATTGAACATTGACAATGAAGAAGATTTCCAACTCTCCACTAACAAGTTAGGCCAAAAGGGTGGCAAGAAGAGGCAAAAGATGCAGACCATTGAATGTGATAATTAA 1422 0.41 MVLQDIKGGRIQASINKGLFKKWRGFFEEFKMYTMSNFIVVDKMEKIKTTRNRWTLNFSHRTVVVRVENPSFSLEPFCLKPIPELLAAEKLDDSQLLDIIGEVVGKEDPRDIITSKGKETKRMVVVIVDLDNNNLDCVLFGDMVDQIVPHLEDGRVEPLIVVLQFFKPSRWNDKVSVQSHFDVSKIHVNPDMKEVSGHGVQSGAAELKRGGVVVKSIEDALNSTEEGPIWIGGTIVSINAGNNDWFYKSCRKCPKKVETPIGNRYECSKCGHTHGSASLRYKVEVMAYDGTGSITMLMWDRETTQLIGRQAKQIKDEDCLEGEGYPPTLDNMMDKKLLFKINVKTANINKHDQVYTIMKICDDEDIVEKNCPMEFISNPSDVLTENGISNSMDVSATVANLKSDNNSQCSVDVVEDSVTSLKCKIPTRRALNGVKHAVSLNIDNEEDFQLSTNKLGQKGGKKRQKMQTIECDN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0981 473 CDD RPA1_DBD_C 214 360 IPR013955 -
Amo07g0981 473 Pfam Replication factor-A C terminal domain 233 360 IPR013955 -
Amo07g0981 473 SUPERFAMILY Nucleic acid-binding proteins 81 195 IPR012340 -
Amo07g0981 473 Gene3D - 197 371 IPR012340 -
Amo07g0981 473 PANTHER BNAC07G49340D PROTEIN 4 423 - -
Amo07g0981 473 Gene3D - 74 196 IPR012340 -
Amo07g0981 473 Gene3D - 1 69 IPR012340 -
Amo07g0981 473 CDD RPA1_DBD_B_like 98 195 - -
Amo07g0981 473 SUPERFAMILY Nucleic acid-binding proteins 218 368 IPR012340 -
Amo07g0981 473 PANTHER REPLICATION FACTOR A 1, RFA1 4 423 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo07g0981 473 MobiDBLite consensus disorder prediction 454 473 - -
Amo07g0981 473 Pfam Domain of unknown function DUF223 1 68 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0981 Amo-Chr7 18160836 18163466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0981 3 349 Core DNA Replication Machinery Family AT5G08020 23.545 7.70e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0981 - - aip:107635133 692.189