Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0970 ATGGATCCTAAGAAAATCAACAAAATGATCTCGAATCGGCTCTCTGCACAGAGATCTAGACAAAGGAAAGTTCGATATCTACTCAATTTAGAAGAGCAAATGAAAATTTTTCAGGAGAAAGTAACAACTCTCCGTACACAAATTACATCCTACACAAATCAAAAACAACTTTTGATGTCGGAACAGACGATGTTGCGCCAGAAATTGGAAGCCATTGAGAAAGAAAAATCACTTAGAAATGCTGAAACTGAAAAAAAGAATGCGGAATTGAAGATTCTGAAGGAACTTCGAATGAAGAACGAGTTGGAAGAGCTGTTTGGAGTACCAATTTTCAATTGGGATGCTATTCGACATCCAATATCAAGTCGTCCCAACTTAGGTCAAGGTATGTGTCTATATATATATATATTAGAAAATGAATTTCTAAAAATAATATTTTTGTTACTTTAG 450 0.3422 MDPKKINKMISNRLSAQRSRQRKVRYLLNLEEQMKIFQEKVTTLRTQITSYTNQKQLLMSEQTMLRQKLEAIEKEKSLRNAETEKKNAELKILKELRMKNELEELFGVPIFNWDAIRHPISSRPNLGQGMCLYIYILENEFLKIIFLLL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0970 149 PANTHER ACTIVATOR OF SPOMIN LUC3 1 101 - -
Amo07g0970 149 Coils Coil 27 47 - -
Amo07g0970 149 SMART brlzneu 1 64 IPR004827 GO:0003700|GO:0006355
Amo07g0970 149 PANTHER BASIC LEUCINE ZIPPER 34 1 101 - -
Amo07g0970 149 Coils Coil 55 105 - -
Amo07g0970 149 Pfam bZIP transcription factor 4 60 IPR004827 GO:0003700|GO:0006355
Amo07g0970 149 Gene3D - 2 63 - -
Amo07g0970 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 8 22 IPR004827 GO:0003700|GO:0006355
Amo07g0970 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 2 65 IPR004827 GO:0003700|GO:0006355
Amo07g0970 149 SUPERFAMILY Leucine zipper domain 4 59 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0970 Amo-Chr7 17876221 17878810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0970 2 94 bZIP Transcription Factor Family AT2G21230 37.634 5.56e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo07g0970 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0970 - - adu:107458287 247.284