Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0966 ATGACAAACACTTCAAAGGTTATTACATGCAAAGGTGCTGTTTGTTGGGGTGCTGGTGAAGCTGTGAGATTAGAAGAGATACAAATGATTTGTGCTAGCATCTGCCACACTGATATCACCACCATTCAAGGATTATTACCATTTTTTCGTTATCCAATAGCTCTTGGTCACGAAGGAGTTGGGGTTGTGGAATCAGTTGGAGATGGAGTGACAAATCTAAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGAAAATCAAACTTGTGCTTAACATATCCTATGAGGATGAGTGCCTTGATGCCAGATAACACTTCAAGATTGTCCTGCAAAGGCAACATACACGTTATCGATGTTAACTACCTTATTAAGGTTGATCCAATCATTAATCAGCTCATGCCAGCTTCATCTCATGTGGGATTCTCAACTGGCTATGGAGCTGCATGGAGAGAAGCCAAAGTTGAAAGTGGATCAAGTGTTGTTGTTTTTGGTCTTGGTGCTGTTGGATTATGGAGCAAAAATTGGGGGCAAGAAAGAATAATAGGAATTGACACAAATAACTTGAAGAGAGAAAAAGGAGAAGCATTTGGAATGACTCACTTTATAAATCCAAATGATTCTGATAAATCTCCAACTATTTCACATTGTGGAAGGCAATATCATTGGAGCAGGAATGAAGCTACTGTGCCTCTTGGTCAATTTTCACTTCTTTTTGGCAGAACTTTGAAAGGTTCTATTTTTGGAGGGCTTAAAGCCATTTCAGATCTTTCTATTATAGCTGACAAGTGCCTCAAGCAGGAGTTTCCTCTTGAAGAATTACACACCCATGAGGTCCAATTGGAAGATGTAAACGAAGCATTTGAGTTGTTGAAACAGCCCAACTGTGTGAAAATTGTCATCAAGATGTGA 942 0.3949 MTNTSKVITCKGAVCWGAGEAVRLEEIQMICASICHTDITTIQGLLPFFRYPIALGHEGVGVVESVGDGVTNLKEGDMVIPTYIGECQECENCISGKSNLCLTYPMRMSALMPDNTSRLSCKGNIHVIDVNYLIKVDPIINQLMPASSHVGFSTGYGAAWREAKVESGSSVVVFGLGAVGLWSKNWGQERIIGIDTNNLKREKGEAFGMTHFINPNDSDKSPTISHCGRQYHWSRNEATVPLGQFSLLFGRTLKGSIFGGLKAISDLSIIADKCLKQEFPLEELHTHEVQLEDVNEAFELLKQPNCVKIVIKM* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0966 313 Gene3D - 257 308 - -
Amo07g0966 313 Gene3D - 27 154 - -
Amo07g0966 313 Gene3D - 236 256 - -
Amo07g0966 313 SUPERFAMILY GroES-like 4 174 IPR011032 -
Amo07g0966 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 269 IPR036291 -
Amo07g0966 313 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 56 70 IPR002328 GO:0008270|GO:0016491
Amo07g0966 313 PANTHER ALCOHOL DEHYDROGENASE 5 221 - -
Amo07g0966 313 PANTHER ALCOHOL DEHYDROGENASE 240 312 - -
Amo07g0966 313 Pfam Alcohol dehydrogenase GroES-like domain 27 103 IPR013154 -
Amo07g0966 313 Gene3D - 155 220 - -
Amo07g0966 313 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 221 - -
Amo07g0966 313 PANTHER ALCOHOL DEHYDROGENASE-RELATED 240 312 - -
Amo07g0966 313 SUPERFAMILY GroES-like 265 311 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0966 Amo-Chr7 17782786 17785150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0966 27 305 Monolignol Biosynthesis Gene Families AT2G21730 25.868 1.10e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0966 K00121 - gmx:100798341 382.489