Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0948 ATGGATTCGAATTCTCCAGAGGTTGTGCAAGTTAATTCAGGTTCACAAATGGATGTAGATTCACAAGAACAAGAAGAAGACATGCAAGTGGATTCAGATGAAGCCGTGCAACAAGCCAATTCAGAATCGCAAGAAGCGAAAACAGATATTGCTCTGATCATGCCAACACTCACTGCTTATATGAACGTGATAAGGACTAATAATTCCACGGTGATTGATGCGATTCACAACTACTTGGGACAATACCTTCAATCCGAAGAAATCGATGACTTGGACTTCATGGAACATATCTCAATCGATGCCTCCAACTTGGTGATCAACGCGATTCATCCAGATATGATTGATAACCTCCACAAAGAAGTTAAGATGATGCTCGAAGCAGGCTTTGACAGAGAATGTTGCAACGAGTACAGCAAATTTCGCACTAAGTGCTTAGGAAGCTACCTGTCATATATGAAGACTCTGCAGCCACAGCTTGAATTTGAGGAAAATGCTAAGAAGGGGACAAAGTTTTTTAATCATGAGATTAGGGAATGGACTAAAGTTTCAAATGTAATTGTGAGGGTTTTGCTTCCAAGTGAAAGAACACTCTGCCAGCGCGCTTTCTTGCGTTACACGGAAGCTAAGAATCTTGCTTTAATGGAGGTTTGTAGGCCGTTGCTGATTAGAATACTAGATTCCGCGGTTAAACATGCAGTTGAACTTGCTCGCTCCAATAAAATTGAATATTTTTCCAGGATTTCCAGAGTGTTCAAAGCATTTCATGACTTGATTCCGGAGATTGAGTCGCTGTTTCCCAGCCCTGAGCCACTTGGCGATTCGATAAGAAATGAAGTCATCAACACTAGAAAGAGGTTGGGGAAAGCAACTATGGACATTCTTGAGAGGCTAGAGGATTGGATTTACAAGGAGAATGAGATGGCGAGTTTTTATGGAGGGCTTTATCCGATAATCTCTTGGGATGTGATGAACTGCCTGGGGGAAATCTGCGAAGCTTGGACTGTAATCGGCCTTGAGAAAGTTCTAGAAGAGATTCCAATGGTTTCTGATGGAGAAGGAACTGCTTCTTGTTCTTCATTCTCTGTTCAGTTTGATAGGATAATAGAGATGTTAAATAGCCATGTGGAAATCGAATCTAAGAAATATACTGACCCTGCTGAGGGCTATATTTTCATGATGAATAGTCAGAGGTATATACAACAGAAGATAATTGAGTGTCAATCAAAAATGAGCACGATTTTGCTGATGATGAATGGCGCGATCGATGAGAATAATGCCAAGGCGAGACAGAATCTCGAAGATTATCGAGGAAGCTCGTGGGATGAGGTTATTGGGCTTTTGAAGCAGGGCGACGGAGACGAGCCAAATGAGGTGGAATCTATGAAAGAGAATCTCAAATTGTTCAATGTTCAGTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTTCTTGATGACGAGCTAAGAAAGGAAATAAGAGAGACCATAGAGGAAATTTTGTTGCCAAGTTATGGAACCTTCATTGGTAAGTTTCAGAAAGTTCTTGGTTCTGATGCTGATAGGTACATTGAGTATTCAATGTATGACATTGATGCTCTACTCAATGATTTGTTTCGCGGAGGCAGTTGA 1632 0.4105 MDSNSPEVVQVNSGSQMDVDSQEQEEDMQVDSDEAVQQANSESQEAKTDIALIMPTLTAYMNVIRTNNSTVIDAIHNYLGQYLQSEEIDDLDFMEHISIDASNLVINAIHPDMIDNLHKEVKMMLEAGFDRECCNEYSKFRTKCLGSYLSYMKTLQPQLEFEENAKKGTKFFNHEIREWTKVSNVIVRVLLPSERTLCQRAFLRYTEAKNLALMEVCRPLLIRILDSAVKHAVELARSNKIEYFSRISRVFKAFHDLIPEIESLFPSPEPLGDSIRNEVINTRKRLGKATMDILERLEDWIYKENEMASFYGGLYPIISWDVMNCLGEICEAWTVIGLEKVLEEIPMVSDGEGTASCSSFSVQFDRIIEMLNSHVEIESKKYTDPAEGYIFMMNSQRYIQQKIIECQSKMSTILLMMNGAIDENNAKARQNLEDYRGSSWDEVIGLLKQGDGDEPNEVESMKENLKLFNVQFKEICRVQSTWFVLDDELRKEIRETIEEILLPSYGTFIGKFQKVLGSDADRYIEYSMYDIDALLNDLFRGGS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0948 543 Gene3D Exocyst complex component Exo70 23 543 - -
Amo07g0948 543 MobiDBLite consensus disorder prediction 1 19 - -
Amo07g0948 543 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 32 540 - -
Amo07g0948 543 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 540 IPR004140 GO:0000145|GO:0006887
Amo07g0948 543 SUPERFAMILY Cullin repeat-like 67 539 IPR016159 -
Amo07g0948 543 Pfam Exo70 exocyst complex subunit 178 537 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo07g0948 543 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0948 Amo-Chr7 17485318 17487189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0948 103 541 EXO70 exocyst subunit family AT5G58430 38.288 8.73e-86 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0948 K07195 - adu:107458298 1031.55