LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo07g0948	ATGGATTCGAATTCTCCAGAGGTTGTGCAAGTTAATTCAGGTTCACAAATGGATGTAGATTCACAAGAACAAGAAGAAGACATGCAAGTGGATTCAGATGAAGCCGTGCAACAAGCCAATTCAGAATCGCAAGAAGCGAAAACAGATATTGCTCTGATCATGCCAACACTCACTGCTTATATGAACGTGATAAGGACTAATAATTCCACGGTGATTGATGCGATTCACAACTACTTGGGACAATACCTTCAATCCGAAGAAATCGATGACTTGGACTTCATGGAACATATCTCAATCGATGCCTCCAACTTGGTGATCAACGCGATTCATCCAGATATGATTGATAACCTCCACAAAGAAGTTAAGATGATGCTCGAAGCAGGCTTTGACAGAGAATGTTGCAACGAGTACAGCAAATTTCGCACTAAGTGCTTAGGAAGCTACCTGTCATATATGAAGACTCTGCAGCCACAGCTTGAATTTGAGGAAAATGCTAAGAAGGGGACAAAGTTTTTTAATCATGAGATTAGGGAATGGACTAAAGTTTCAAATGTAATTGTGAGGGTTTTGCTTCCAAGTGAAAGAACACTCTGCCAGCGCGCTTTCTTGCGTTACACGGAAGCTAAGAATCTTGCTTTAATGGAGGTTTGTAGGCCGTTGCTGATTAGAATACTAGATTCCGCGGTTAAACATGCAGTTGAACTTGCTCGCTCCAATAAAATTGAATATTTTTCCAGGATTTCCAGAGTGTTCAAAGCATTTCATGACTTGATTCCGGAGATTGAGTCGCTGTTTCCCAGCCCTGAGCCACTTGGCGATTCGATAAGAAATGAAGTCATCAACACTAGAAAGAGGTTGGGGAAAGCAACTATGGACATTCTTGAGAGGCTAGAGGATTGGATTTACAAGGAGAATGAGATGGCGAGTTTTTATGGAGGGCTTTATCCGATAATCTCTTGGGATGTGATGAACTGCCTGGGGGAAATCTGCGAAGCTTGGACTGTAATCGGCCTTGAGAAAGTTCTAGAAGAGATTCCAATGGTTTCTGATGGAGAAGGAACTGCTTCTTGTTCTTCATTCTCTGTTCAGTTTGATAGGATAATAGAGATGTTAAATAGCCATGTGGAAATCGAATCTAAGAAATATACTGACCCTGCTGAGGGCTATATTTTCATGATGAATAGTCAGAGGTATATACAACAGAAGATAATTGAGTGTCAATCAAAAATGAGCACGATTTTGCTGATGATGAATGGCGCGATCGATGAGAATAATGCCAAGGCGAGACAGAATCTCGAAGATTATCGAGGAAGCTCGTGGGATGAGGTTATTGGGCTTTTGAAGCAGGGCGACGGAGACGAGCCAAATGAGGTGGAATCTATGAAAGAGAATCTCAAATTGTTCAATGTTCAGTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTTCTTGATGACGAGCTAAGAAAGGAAATAAGAGAGACCATAGAGGAAATTTTGTTGCCAAGTTATGGAACCTTCATTGGTAAGTTTCAGAAAGTTCTTGGTTCTGATGCTGATAGGTACATTGAGTATTCAATGTATGACATTGATGCTCTACTCAATGATTTGTTTCGCGGAGGCAGTTGA	1632	0.4105	MDSNSPEVVQVNSGSQMDVDSQEQEEDMQVDSDEAVQQANSESQEAKTDIALIMPTLTAYMNVIRTNNSTVIDAIHNYLGQYLQSEEIDDLDFMEHISIDASNLVINAIHPDMIDNLHKEVKMMLEAGFDRECCNEYSKFRTKCLGSYLSYMKTLQPQLEFEENAKKGTKFFNHEIREWTKVSNVIVRVLLPSERTLCQRAFLRYTEAKNLALMEVCRPLLIRILDSAVKHAVELARSNKIEYFSRISRVFKAFHDLIPEIESLFPSPEPLGDSIRNEVINTRKRLGKATMDILERLEDWIYKENEMASFYGGLYPIISWDVMNCLGEICEAWTVIGLEKVLEEIPMVSDGEGTASCSSFSVQFDRIIEMLNSHVEIESKKYTDPAEGYIFMMNSQRYIQQKIIECQSKMSTILLMMNGAIDENNAKARQNLEDYRGSSWDEVIGLLKQGDGDEPNEVESMKENLKLFNVQFKEICRVQSTWFVLDDELRKEIRETIEEILLPSYGTFIGKFQKVLGSDADRYIEYSMYDIDALLNDLFRGGS*	544

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo07g0948	543	Gene3D	Exocyst complex component Exo70	23	543	-	-
	Amo07g0948	543	MobiDBLite	consensus disorder prediction	1	19	-	-
	Amo07g0948	543	PANTHER	EXOCYST COMPLEX COMPONENT EXO70B1	32	540	-	-
	Amo07g0948	543	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	32	540	IPR004140	GO:0000145\|GO:0006887
	Amo07g0948	543	SUPERFAMILY	Cullin repeat-like	67	539	IPR016159	-
	Amo07g0948	543	Pfam	Exo70 exocyst complex subunit	178	537	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Amo07g0948	543	MobiDBLite	consensus disorder prediction	1	45	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo07g0948	Amo-Chr7	17485318	17487189	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo07g0948	103	541	EXO70 exocyst subunit family	AT5G58430	38.288	8.73e-86	276

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo07g0948	K07195		-	adu:107458298	1031.55

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