Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0938 ATGTCTTGCTCCGTCGCAGTTTCCAATTCTCCAGTGTTCTCTCCTCCGTCATCGCTATTCTACTCCAAGCCTTCAATCATTACTTCAATTTCTGCTGCTGCGGCTTCTTCTACGGCGTCGTCTTGCTCTTCTCCCGCTTCTTCTTCTTCTCCTTCTCCTTCTTCTCCTTCTTCGTCGCCGTTGCGTCTTCGTCTTCCCAAGCCGCCTATTCCCGCTTCGCTTTCCGGTGTTGTTGCCGTTTCAGCTTCCGCTACGTCACCAAACGGCACCGTTTTGAAGAGGAAGAGGCCTGCTAGGCTTGATATACCTGTTAGCTCCTTGGCCTTTGGGATTCCCCCCACACCCTCTGCTGCGCCGCCGCGTGATGTTGTGGAGGAGGAGCGTGATGCGTTCTCTGTTTATTGCAAGAGAGGGAGGAGGGAGTACATGGAAGATCGCTACTCCGCTGCTGATAACCTACGCGGACAACAAAAACTGGCATTTTTTGGAATTTTCGATGGGCACGGTGGTGCAAAGGCTGCCGAATTTGTGGCAAATAACTTAGAAAAGAATGTGTTAGATGAAGTGATTATTAGCGAAGAAGAAGATAGCATTGAGGAGGCTGTGAAGCGCGGTTATCTCAAGACTGATTCTGCTTTCTTGAAAAGCGATCTCCATGGCGGATCTTGCTGTGTCACCGCTTTGATTCGCAATGGTAACCTTGCTGTGTCCAATGCCGGCGATTGCCGCGCTGTTATAAGCAGAGGAGGGGTTGCTGAGGCCCTCACTTCCGATCACCGCCCTTCCCGGGAAGATGAAAGGGAAAGAATTGAGACTCAGGGTGGCTATGTTGATCTGTGCCGCGGTGTATGGAGGATCCAAGGATCCCTTGCTGTGTCGAGGGGAATCGGCGATAGGCACCTAAAACAATGGGTGATCGCCGAACCCGAGACCAAAGTTATCAGGATCGAACCTGAACATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAAGAAGCAGTAGACATTGCTCGACCTCTTTGCGTAGGTAGCAGCAAGCCGCAGCCATTGCTGGCATGTAAAAAGCTTGTAGATTTGTCCGTTTCGCGTGGCTCCATGGATGATACAAGTGTTATGCTTATCATGCTTGGCCGTTACATTTGA 1161 0.5022 MSCSVAVSNSPVFSPPSSLFYSKPSIITSISAAAASSTASSCSSPASSSSPSPSSPSSSPLRLRLPKPPIPASLSGVVAVSASATSPNGTVLKRKRPARLDIPVSSLAFGIPPTPSAAPPRDVVEEERDAFSVYCKRGRREYMEDRYSAADNLRGQQKLAFFGIFDGHGGAKAAEFVANNLEKNVLDEVIISEEEDSIEEAVKRGYLKTDSAFLKSDLHGGSCCVTALIRNGNLAVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETQGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVIAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARPLCVGSSKPQPLLACKKLVDLSVSRGSMDDTSVMLIMLGRYI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0938 386 Gene3D - 121 385 IPR036457 -
Amo07g0938 386 ProSiteProfiles PPM-type phosphatase domain profile. 130 382 IPR001932 -
Amo07g0938 386 SMART PP2C_4 120 380 IPR001932 -
Amo07g0938 386 MobiDBLite consensus disorder prediction 39 61 - -
Amo07g0938 386 Pfam Protein phosphatase 2C 132 374 IPR001932 -
Amo07g0938 386 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Amo07g0938 386 MobiDBLite consensus disorder prediction 39 66 - -
Amo07g0938 386 CDD PP2Cc 131 380 IPR001932 -
Amo07g0938 386 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 385 - -
Amo07g0938 386 PANTHER PROTEIN PHOSPHATASE 2C 3 385 IPR015655 GO:0004722|GO:0006470
Amo07g0938 386 SUPERFAMILY PP2C-like 130 383 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0938 Amo-Chr7 17287303 17289241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0938 1 386 PP2C-type Phosphatase Gene Family AT2G30020 62.720 2.56e-161 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0904 17 22287203 22289413 Amo07g0938 07 17287303 17289241 hybridization