Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0928 ATGGCTCTTGCATCACTTGATTCCGATGCAAAACTTGAGAAACAAGAAGATGATGCCTTTATGTTTGCGCAAATGGCATGTTCAGTTGTGGTTCCAATGGCTGTGAGGACCACAATAGAGCTTGGTGTATTTGACATTATAGCAAAAGAAGGCGAAGGTGCAAAGCTCTCAGCAAAAGACATTGCGGATCGCATTGGAAGCAACAACCCTGAAGCAGCATCAATATCCAGAAAGCTCTAA 240 0.4333 MALASLDSDAKLEKQEDDAFMFAQMACSVVVPMAVRTTIELGVFDIIAKEGEGAKLSAKDIADRIGSNNPEAASISRKL* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0928 79 Pfam Dimerisation domain 33 74 IPR012967 GO:0046983
Amo07g0928 79 SUPERFAMILY "Winged helix" DNA-binding domain 16 74 IPR036390 -
Amo07g0928 79 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 76 - -
Amo07g0928 79 Gene3D - 4 79 IPR036388 -
Amo07g0928 79 PANTHER O-METHYLTRANSFERASE 13 76 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0928 Amo-Chr7 17050506 17050807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0928 16 72 Monolignol Biosynthesis Gene Families AT5G54160 39.655 4.46e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0928 K13066 - ahf:112764389 131.339