Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0911 ATGAACCCAAAACATAGCTTCATGTTGTACTATGTAACCATAGTATCATTACTACTACTACACTACTATGTTGCCATGGCATCAATTCTAAACATCACCACCGATCAATCATCTTTAATTGCATTCAAGAACCACATATCTCAAGACCCCAACAATGTTCTCACAAAGAATTGGTCTCACAACACCCACGTTTGCAATTGGGTGGGAATCACATGTGGCTCTTCCCACCATAGAGTTGTTTCCTTAAACCTTTCCAACATGGGCCTTATTGGAACCGTTCCACCTAACTTAGCAAACTTGTCCTTCCTTAATCACTTGATCCTTCCAAACAATAGCTTTCAAGGTAATCTCCCTTACGAACTAGCTTCATTACATAGATTGAGAACCATTGACCTTCGATTCAACAACCTTAGGGGGAACATCATTGCTTCGATGTTTGTCTCAATGACAAAACTCACAACCTTGTCCCTTGCATGGAACAGTTTCACCGGCACAACTCCATGTTCCTTATTCAACATGACATCACTTCGAATTCTTGATTTTAGGGGTAACAATCTCTGGGGCTCCCTACCTTCTAACATGTTCTTGTCACCTTCTTTGGAATATGTCACTTTCTATGGTAACAAAATCTCCGGCACTCTCTCTTCCTCTGTTTCCAACAATTCGCAGCAGCTGCGAGTAGTTGAACTACGCAAAAACCGGATGTTTGGGGAACTTCCCCGAAACATTTTCCGGCATCTTCCTTACTTGGAAGTGCTTTCATTATCTAGAAATGGATTCTTTGGTGAGATTCCAGATAGCTTGTTCAGCTGCAAAGAGCTATGGCATTTAGATTTGTCCAACAACAACTTCACTGGAAACATACCTCCTGGGATTGGGAACTTAACCCACCTCAAATATATCTACCTTCAATCCAACAATTTGGAGAAACTACAAGGTCTCATGTTAAGTGATAACAAGTTGGAAGGTAGCATTCCAAGCAGCCTTGGAAACATTGTCCATTTGGGTGATCTCTCCTTAGCACAAAATGAATTCGAAGGAGTTATTCCGGAATCTTTTGGTCGTTTGGCAAGTCTAGAACGTCTTGACTTGTCGAAAAACAACTTGTCCGGTGTTATTCCTAAGTCATTGGAGTCACTTTTGTATTTGAACTACTTCAATGTTTCTTACAATAAGTTGGAAGGAGAAATTCCTCATGGTGGACCATTTGCTAATTTCTCTGTTCAATCATTCATTATGAACAGAGGACTCTGTGGCGCTTCCCGCTTGCAATTCCCAGAATGTGAAACAACGGGTAGATCTCGAAAAACAACTGCCTACATTTTCTTGAAATATATTTTACCAATAAGTAGTGTGGCCACTCTCCTTGTATTGGCATTCCTAAGCATCTTAAAGTTCCAAAATCATAATAAGGTGCTTCAAAATTTTGAAGTGGATCAAGCAATGGCAAGATGGAGAAGAATTTCATATTATGAAATTCAACAAGCAACAGATAGGTTTAATGGTGACAACTTACTTGGTATAGGGAGCTTCGGAAAAGTTTACAAAGGCGTCCTCTCGGACGGGACGAATGTTGCAATAAAGGTTTTCAATTTGGGGCTAGAAGGAGCATTTAGGAGTTTTGATCTTGAATGTGAAGTATTGCGCAATATTCGCCATCGAAACTTGACCAAAATCATAAGCAGTTGTAGTAACTTGGATTTCAAGGCATTGGTTATGAGCTACATGGTCAATGGGAGTTTGGAGAAGTGGTTACATTCAGAAGACCATAGTTTGAGTATGATAGAGAGGATTAACATAGTGATAGATATTGCAGAAGCAATTAATTATCTTCACCATGGTGGTTCTATATCAATTGTGCATTGTGATTTAAAACCAAGCAATATATTGCTAGATGAAGACATGGTTGCTCATGTCACAGATTTTGGCATTGCAAAGCTGCTAAATGGTGGAAATTCCATGACACATACATTGACTCTAGCCACAATAGGGTATATGGCTCCAGGTGATGTTTAA 2016 0.3968 MNPKHSFMLYYVTIVSLLLLHYYVAMASILNITTDQSSLIAFKNHISQDPNNVLTKNWSHNTHVCNWVGITCGSSHHRVVSLNLSNMGLIGTVPPNLANLSFLNHLILPNNSFQGNLPYELASLHRLRTIDLRFNNLRGNIIASMFVSMTKLTTLSLAWNSFTGTTPCSLFNMTSLRILDFRGNNLWGSLPSNMFLSPSLEYVTFYGNKISGTLSSSVSNNSQQLRVVELRKNRMFGELPRNIFRHLPYLEVLSLSRNGFFGEIPDSLFSCKELWHLDLSNNNFTGNIPPGIGNLTHLKYIYLQSNNLEKLQGLMLSDNKLEGSIPSSLGNIVHLGDLSLAQNEFEGVIPESFGRLASLERLDLSKNNLSGVIPKSLESLLYLNYFNVSYNKLEGEIPHGGPFANFSVQSFIMNRGLCGASRLQFPECETTGRSRKTTAYIFLKYILPISSVATLLVLAFLSILKFQNHNKVLQNFEVDQAMARWRRISYYEIQQATDRFNGDNLLGIGSFGKVYKGVLSDGTNVAIKVFNLGLEGAFRSFDLECEVLRNIRHRNLTKIISSCSNLDFKALVMSYMVNGSLEKWLHSEDHSLSMIERINIVIDIAEAINYLHHGGSISIVHCDLKPSNILLDEDMVAHVTDFGIAKLLNGGNSMTHTLTLATIGYMAPGDV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0911 671 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Amo07g0911 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Amo07g0911 671 SUPERFAMILY RNI-like 81 397 - -
Amo07g0911 671 Gene3D Ribonuclease Inhibitor 93 436 IPR032675 -
Amo07g0911 671 Pfam Protein kinase domain 503 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0911 671 Gene3D Phosphorylase Kinase; domain 1 470 575 - -
Amo07g0911 671 SMART LRR_typ_2 356 379 IPR003591 -
Amo07g0911 671 SMART LRR_typ_2 173 197 IPR003591 -
Amo07g0911 671 SMART LRR_typ_2 149 172 IPR003591 -
Amo07g0911 671 SMART LRR_typ_2 295 318 IPR003591 -
Amo07g0911 671 SMART LRR_typ_2 247 271 IPR003591 -
Amo07g0911 671 SUPERFAMILY Protein kinase-like (PK-like) 479 668 IPR011009 -
Amo07g0911 671 Gene3D Transferase(Phosphotransferase) domain 1 576 669 - -
Amo07g0911 671 Pfam Leucine rich repeat 224 284 IPR001611 GO:0005515
Amo07g0911 671 Pfam Leucine rich repeat 335 393 IPR001611 GO:0005515
Amo07g0911 671 Gene3D Ribonuclease Inhibitor 25 92 IPR032675 -
Amo07g0911 671 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 311 668 - -
Amo07g0911 671 PRINTS Leucine-rich repeat signature 274 287 - -
Amo07g0911 671 PRINTS Leucine-rich repeat signature 356 369 - -
Amo07g0911 671 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 311 668 - -
Amo07g0911 671 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 150 - -
Amo07g0911 671 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 273 309 - -
Amo07g0911 671 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 6 150 - -
Amo07g0911 671 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 147 289 - -
Amo07g0911 671 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 273 309 - -
Amo07g0911 671 SMART serkin_6 500 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0911 671 ProSiteProfiles Protein kinase domain profile. 500 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0911 671 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 147 289 - -
Amo07g0911 671 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0911 Amo-Chr7 16683929 16687631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0911 79 668 Receptor kinase-like Gene Family AT3G47570 35.331 4.09e-99 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0911 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0911 - K13420 ahf:114924790 748.814