Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0881 ATGGCACCAGTTTCATTACCCCCAGGTTTCAGGTTCCATCCAACYGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGTAAGATTGAGTTGGAGATCATTGCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGAGATAGGAAGTATCCAAATGGGTCAAGAACGAACCGTGCAACAAAATCTGGGTATTGGAAGGCGACAGGGAAGGACAGAAAAGTAAATTCACAATGTCGTGCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGTGGAAGGGCACCTCATGGCTCTCGCACTGATTGGGTTATGCATGAATATCGTCTTGATGATAGAGAATGTGAAAATGCTTCTTCTGGCTTGCAGGATGCATATGCACTTTGTCGTGTGTTCAAGAAGAGTGCAGTKATAACCCCTAAAGTTGATGAGGAACATCATCATCACCATCACTATGTTAATGCTAATAATCACAATAATAGCAGCCATGCTTTGCCAATTACAAGTGATCAATCGTCAAGTATGGAGTTATATTCTGAAGGAAGGGGTGAAGATTTGGATAATAGCTCTAATTATTTGGTTCCCATYGATACTACTTSCACACTACCCCTCAACAACATGGTGATGAACAATAATAATAGTGATGCTTCTTTCAATAGTAGGGATAATAATGGRAAATGGTCACAATTTRTTTCAGAAGATCCATTGTTCAGCTTTCCAACTTCCTCCTCATCATTTGCTAATAGTTATGGATCTATAACATACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTCACCATGCCTCCATTGGAGGTAGAGGACTTCCCTCATGTTGGAACCTCGGAGCTGAAAATGACAGAATTARCCTCGGGTGCCGSATCCRCCGTGCACGGAACCCGAAACGAAACSGATATCTTGCAGGAAATTCTTTCGGTTGCTCATGCTTCCCAGGAGTTGATAAACCACTCCAGCTACTCATCATCATGGGGTGGTGATGGTGGTGGCAACCATGAAAATTGTGCAACTCATGGAGATGATTTCACTTTCATGGTTGGTAGCACTAACTACAATAATAATAATTTGAATGACATTAACWMCATGAGATATGTTGATAGAAATTGGGAAGATCCAAACASTTCAAGATCCATTGATATTGGATATTTGGATGAAGAATTTAAGGGAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCTACAAAAGATTTAGAAAAGAACTTCACGGAAGAGCAAAAGATTGTTCCAATAGAGGATATATCAAGCTTCCGGACAAATAATAAAGAAGAAAATGAGGTGCAAGAATCTGAGCAACACCATAGCAACAAGGAACTATTGATCAATGATTTCTCATTAGGGTTCAACCCTAATAACAACAACAGCGAGAACTTTCTAGATGATGATCATAACAACATGGATAAYGATGATTACTCAAGTTCTCCAAGCTTTGAAGTCATTGAGGAAATAAGGGTCAGCCATGGATCAATGTTTGTTTCRACTCGCCGCGTCGCYGACACATTCTTCCACCAAATAGTTCCTTCACAAACCGTCCAGGTTCACCTCCTCAATCCAGTGATAACAAGCAATGAAGAAGAGACATTGATGATGATAATGGAGAGGAATCAAGGGTATTTCGGGGATTTTCTTTTCARGACAATAGCAACTGCGTTTGTGCTCATCTTTGAACTTCTATTCATGCATTGTGATTATTTGAAGGAAGAAGTGGAATTGGTGAAGAGAAAGAGATCATCACAATCATCATCTAAGATCATGAAATGGAGCAACAATAATAAGGTTTGGTTTGTTGGTTTCAAGAGTAGTGAGAAGGGCTTTGGTGCAATTTTGAAGAAAATAGGGATTTTTCTCACAATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATGTTATTGTTAACCCTTGA 2037 0.3986 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIAEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQCRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDDRECENASSGLQDAYALCRVFKKSAVITPKVDEEHHHHHHYVNANNHNNSSHALPITSDQSSSMELYSEGRGEDLDNSSNYLVPIDTTXTLPLNNMVMNNNNSDASFNSRDNNGKWSQFXSEDPLFSFPTSSSSFANSYGSITYPPSKVDIALECARMQHRFTMPPLEVEDFPHVGTSELKMTELXSGAXSXVHGTRNETDILQEILSVAHASQELINHSSYSSSWGGDGGGNHENCATHGDDFTFMVGSTNYNNNNLNDINXMRYVDRNWEDPNXSRSIDIGYLDEEFKGERMVENLRWVGMSTKDLEKNFTEEQKIVPIEDISSFRTNNKEENEVQESEQHHSNKELLINDFSLGFNPNNNNSENFLDDDHNNMDNDDYSSSPSFEVIEEIRVSHGSMFVSTRRVADTFFHQIVPSQTVQVHLLNPVITSNEEETLMMIMERNQGYFGDFLFXTIATAFVLIFELLFMHCDYLKEEVELVKRKRSSQSSSKIMKWSNNNKVWFVGFKSSEKGFGAILKKIGIFLTISLALCTMWANHVIVNP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0881 678 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Amo07g0881 678 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Amo07g0881 678 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 407 - -
Amo07g0881 678 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 407 - -
Amo07g0881 678 MobiDBLite consensus disorder prediction 496 515 - -
Amo07g0881 678 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Amo07g0881 678 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Amo07g0881 678 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0881 Amo-Chr7 16216478 16222723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0881 1 669 NAC Transcription Factor Family AT1G65910 45.098 6.61e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo07g0881 NAM 1.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0881 - - gmx:100809019 774.622