Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0868 ATGGGGAGGAAGCAAAGCTTAAACACAGTGACACCATGTGCTGCTTGCAAGCTTCTTAGAAGAAGGTGTGCTGAGGAGTGTCCCTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCTGCTGTTCATAAAGTCTTTGGTGCAAGCAATGTCTCCAAGATGCTCATGGAAGTAGGAGAGGGGCAAAGAGCAGATGCAGCAAACAGTTTGGTATATGAAGCAAACTTGAGATTAAGAGATCCGGTTTATGGATGCATGGGTGCAATTTCAGGTTTGCAGCAACAAATTCAAACATTGCAAGCGGAAGTCAATGCTGTTAGGGCTGAGATTCTCAAATACAAATATAGAGAAGCTGCTGCCACTGCCACTGCCACTCTCATTTCCATGAATCATCATCATCATCTTCCATCTAATAATAATAATAATCAAGCACCAATTATAATCAATAATAATAATGATAATAATGCTGCAAACTCTTCATCACAACAACAAGGTATTTCTCAACCTCCTCCTCTTCCTCCTCCGCCTTTGCGCCCTGCGCCGCCAAATCCATCTTTACCTTCACCTTCTACTGTTGTGCTTTCTTCATCTTTGTCTTCGTCTTCGGCTTCTTCTGTTTACAACAACACTCCACCTAAAACCACATTGAGTCATGGATCCATTACTAGTGAAAGTGTTCCTTACTTTGCTTAA 699 0.4192 MGRKQSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVGEGQRADAANSLVYEANLRLRDPVYGCMGAISGLQQQIQTLQAEVNAVRAEILKYKYREAAATATATLISMNHHHHLPSNNNNNQAPIIINNNNDNNAANSSSQQQGISQPPPLPPPPLRPAPPNPSLPSPSTVVLSSSLSSSSASSVYNNTPPKTTLSHGSITSESVPYFA* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0868 232 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Amo07g0868 232 PANTHER LOB DOMAIN PROTEIN 5 231 - -
Amo07g0868 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 231 - -
Amo07g0868 232 MobiDBLite consensus disorder prediction 135 232 - -
Amo07g0868 232 MobiDBLite consensus disorder prediction 135 168 - -
Amo07g0868 232 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Amo07g0868 232 Coils Coil 91 118 - -
Amo07g0868 232 MobiDBLite consensus disorder prediction 191 226 - -
Amo07g0868 232 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0868 Amo-Chr7 15771386 15773334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0868 6 120 AS2 family AT2G30340 84.348 1.95e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo07g0868 LOB 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0868 - - adu:107458169 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0709 17 16364491 16366418 Amo07g0868 07 15771386 15773334 hybridization