Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0864 GGTACCAAAGTATTACTCAGTCCTCCAACCTCCAGCCTGCCTCCCACTTTCAGTCTTGTCCGCTGCCTGCTAGACTGCCTCTCATCCCCTTTGCCGTCTCCTCACTACCTCCGGGGGCCTCGCCAGTCACGATTCGCCGGCTTCACCACCTCCCTCATCGGCGACTCCTCACTCAGCCTCGCCTCCTTCGTGGCCAGAACTTTAGCCTCCTCTTCGTCGGCTCCACGCCTCCACGACGTCGTTCAGACCCCAGATCCCCAGCCTCCATCGGCACCGTTTCCGTGGAAGCTGCATCTGCCAGTCTCCGCCGTCTCCTCTGTCTCGCAAGTGCACACTGCACATGTCAGGAAAATGGTGTTTAACTTTTCTCTTTATTTCATGATTGTTGGGTTGAAAATTGTCTACGCCTTCCTCAATGCCACCCTGAACACCAAACTAGTTATGGCAACTGCAACATACCCACCGCCCCCACCATATTATAGGCTCTACAAAGATTACTTGGAGGACCCTAAGTCTGCTCCAGAGCCTCCTCCTCCCATAGAAGGGACCTACGTTTGTTTTGGGGGCACCTACACTGTAACTGGGTATCCACAAATATCTACCATTAGTCAGACTAGTGATGTTTTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAACTCTATCCAAAGGGGGCTAATGTTGATTTCAAGAAGGAGCTGAGATCACTGAATGGAGAATTGCAGCTACACATTTTGGAGCTTGCAGATATTCTTATTGAGAGACCATCACAGTATGCAAGGAGAGTTGAAGAGATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCCTTGCGACCTCATCAGGCAAGAGCAACATTAATTCATATTTTGGAACTTCAGATTGAGCGTCGTAAAGAAGCAGTGGAGGACATAAAGAAGAGAAGAGAAGAGGCACGAAGACTACTTAACGAGTCCCTAGCAACACTTGATGACCAATAG 984 0.4929 GTKVLLSPPTSSLPPTFSLVRCLLDCLSSPLPSPHYLRGPRQSRFAGFTTSLIGDSSLSLASFVARTLASSSSAPRLHDVVQTPDPQPPSAPFPWKLHLPVSAVSSVSQVHTAHVRKMVFNFSLYFMIVGLKIVYAFLNATLNTKLVMATATYPPPPPYYRLYKDYLEDPKSAPEPPPPIEGTYVCFGGTYTVTGYPQISTISQTSDVLPSLEEQGVRQLYPKGANVDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKEAVEDIKKRREEARRLLNESLATLDDQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0864 327 Coils Coil 289 323 - -
Amo07g0864 327 SUPERFAMILY Mediator hinge subcomplex-like 226 318 IPR037212 GO:0016592
Amo07g0864 327 Pfam MED7 protein 151 317 IPR009244 GO:0003712|GO:0006357|GO:0016592
Amo07g0864 327 Gene3D - 221 318 IPR044888 -
Amo07g0864 327 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 148 327 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0864 Amo-Chr7 15688072 15693128 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Amo07g0864 Med7 1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0864 K15148 - gmx:100792250 285.419