Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0839 ATGGCCAACCTTGTTAGGTTCAGCTCCTCCATCCCCTCCCCCGTCACTAAAGACACCCGCGGTTGGCTCCTCGACCCTATCTCGCTAGCTCGAGCTTCTGGCATTTTAGGTGGAGCTTTCACTTGTGCTTCGGTTCATATAGGAGAGATTCGGCATGGCAGGTTGAGAGGAAATCATAGCATATTGAGTTTAGTTGACATAAGACAGAAGTTAATAGCTCTAAATGCAAGTGGTCTTGACAAATTTCTTAAATCAATAGGAAGAAATTCCTCATATGTTAATTTGGAGTTGACTGAACAAAAATTGACAAGAAAGGAAGGTGCTATGGCAATTGCAGTTACAAATCCAACTGATCTTGTGAAAGTTAGACTACAAGCAGAAGGAAAATTTTCAGTTATATTAGAAAAGTTAAGAGTTGTGAGGAAAAACGCCAAGAAGTGGAGGCCAGAGCTAGGGAGCTTAATAAACAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTAAGGTTGAATCAACCGGGTGGAACAGCTTCTCTCATGGATGGAAGTTATGGGTTTGACTGTAACACCTCAGAGGCAGAACCAAAACCAAAAGTGATTCCCCGCAAAGAAGCTCTGCCAAAATCAACGCCGCCACCTTCAGTCCCTACTCCTTCCATCGCCTTCCAAAATAGACAGAGAGAACAAAGAGATAGAGATTTTGACGCGGAGAGGCTTGCTTCGGCAAGGAAGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGGTGGAATTATCATTTCTCGACATGTAGTAGCATCACTAACTGAAAGATCATTGTGCTTGATCCAGAATCAGAGCCAGTGTTTAGCAGATCTATGTGGCGCATTGCACTATGACATTGAAATCAATTTTGGGTTGAAAAAATCAAAATGTAATCCTGTTGTCGCTGCAAGAAATAAACATCTGTGCGAGGTGTGCATCAAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGCAGGCAACCTTTCTCCAAAGGCCACCGGAGGGATAAAAAGGGAAACTCAACTGTTAAGGCGCATCTCTCAAACTGGAAGAAAGAAAAAACCATCTTAATGGATAGATCTATCGCCTTCGGAAGTTCTCGCTTCTCCAACACTTTTAGAATCCATAGAAGTTTACTAATCTGTGACAGTGGTTACTGCACTCCCAATTCGGCCATAGGCGAGTGCAGTTGGAGGAGAAGAGCGAGAAAGACCGCCAAATCTGCTCCTTATTTTACATGTTTGTTCCCCTTGGCAAATATGCAAACATTCCCTCCTAGCAATGCAGGAGGAAGAATAGGACAAGTATATCAACCTATTACAGCTCAAACTGCTGCCAAGAAGTGTATCCCTTTTCTAATTGCATTAAGAGATATAAAGCAACACGACATTACTCAAAGCATGTGCAGGAGGTTGATTGGCTTGTAG 1461 0.4312 MANLVRFSSSIPSPVTKDTRGWLLDPISLARASGILGGAFTCASVHIGEIRHGRLRGNHSILSLVDIRQKLIALNASGLDKFLKSIGRNSSYVNLELTEQKLTRKEGAMAIAVTNPTDLVKVRLQAEGKFSVILEKLRVVRKNAKKWRPELGSLINRKWKEIVDEWVRLNQPGGTASLMDGSYGFDCNTSEAEPKPKVIPRKEALPKSTPPPSVPTPSIAFQNRQREQRDRDFDAERLASARKRLQENYKEAENGGIIISRHVVASLTERSLCLIQNQSQCLADLCGALHYDIEINFGLKKSKCNPVVAARNKHLCEVCIKFFLHQFCDAHSCTGSRQPFSKGHRRDKKGNSTVKAHLSNWKKEKTILMDRSIAFGSSRFSNTFRIHRSLLICDSGYCTPNSAIGECSWRRRARKTAKSAPYFTCLFPLANMQTFPPSNAGGRIGQVYQPITAQTAAKKCIPFLIALRDIKQHDITQSMCRRLIGL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0839 486 Coils Coil 235 255 - -
Amo07g0839 486 MobiDBLite consensus disorder prediction 189 232 - -
Amo07g0839 486 PANTHER OS01G0810200 PROTEIN 2 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0839 Amo-Chr7 13658497 13663926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0839 274 346 C2H2 Transcription Factor Family AT5G63280 43.820 8.07e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0839 - - aip:107622503 162.155