Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0831 ATGGAATTACAAAGTGGAGAGCAAGTTGATAATGTCAAACTTCTGAAAGCTCAAACCCACATATGGAATCATATTTTCAATTTTATAAACTCCATGTCTCTTAAATGTGCTGTTGAGTTGGGCATCCCTGATGCCATTCACAATTATGGCCAGCCTATGCCACACTCAAAGCTCATTGCTTCATTGCAAATTCATCCGTCAAAAACATCCTTCATCTATCGCTTGATGAGAATCTTGATCCATTCTGGCTTTTTCGCTACCAAGAATGGTGCTGACAAAGACCTTGAAGTAAGTTATGTTCTAACCGACTCGTCTATGTTGTTGCTTAAGGGAAACCCTATAAGCATCAGGCCTTTCTTGCTTCTCACGCTAGATCCAATTTTGACAAATTCATGGCATAAATTGTCCACATGGTTCCAAAGTGATAATCCCACACCATTTGAAACGGAACATGGGATCATGTTCTGGAGATATGCCGATCATGAGCCTAAACTTAATGAACTTTTCAATGATGCCATGGCGAGTGATGCTCGATTGGTTAGCAACTTATTACTTAATGACAAGTGGAAGGGTGTGTTTGAGGGTTTGGAATCATTGGTCGATGTTGGTGGTGGCACAGGAACTGTTGCAAAGGCTATTGCAAAATCATTTCCTGGATTAGAGTGCACTGTTCTTGATCTCCCACATGTTATTGCTGGCTTGGAAGGAAGTGAAAACCTTAAATATTGGATTTTGCATGACTGGGAGGACAAAAAATGTTTGAAGATATTGAGAAAATGCAAAGAGGCAATCATGAATAATGGCTCCAAAGAAGGGAAGGTAATTATCATAGATATGGTGATGATGAAGAATGAGAAGAAAGGTGATGATGAATCACTTTAA 882 0.3946 MELQSGEQVDNVKLLKAQTHIWNHIFNFINSMSLKCAVELGIPDAIHNYGQPMPHSKLIASLQIHPSKTSFIYRLMRILIHSGFFATKNGADKDLEVSYVLTDSSMLLLKGNPISIRPFLLLTLDPILTNSWHKLSTWFQSDNPTPFETEHGIMFWRYADHEPKLNELFNDAMASDARLVSNLLLNDKWKGVFEGLESLVDVGGGTGTVAKAIAKSFPGLECTVLDLPHVIAGLEGSENLKYWILHDWEDKKCLKILRKCKEAIMNNGSKEGKVIIIDMVMMKNEKKGDDESL* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0831 293 Gene3D Vaccinia Virus protein VP39 243 290 IPR029063 -
Amo07g0831 293 Gene3D - 4 108 IPR036388 -
Amo07g0831 293 Pfam O-methyltransferase domain 243 287 IPR001077 GO:0008171
Amo07g0831 293 Pfam O-methyltransferase domain 132 232 IPR001077 GO:0008171
Amo07g0831 293 Gene3D Vaccinia Virus protein VP39 109 238 IPR029063 -
Amo07g0831 293 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Amo07g0831 293 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 293 IPR016461 GO:0008168
Amo07g0831 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 281 IPR029063 -
Amo07g0831 293 PANTHER O-METHYLTRANSFERASE 9 242 IPR016461 GO:0008168
Amo07g0831 293 PANTHER O-METHYLTRANSFERASE 244 286 IPR016461 GO:0008168
Amo07g0831 293 SUPERFAMILY "Winged helix" DNA-binding domain 14 113 IPR036390 -
Amo07g0831 293 PANTHER ORCINOL O-METHYLTRANSFERASE 9 242 - -
Amo07g0831 293 PANTHER ORCINOL O-METHYLTRANSFERASE 244 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0831 Amo-Chr7 13401800 13403775 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0831 32 281 Monolignol Biosynthesis Gene Families AT5G54160 30.147 3.23e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0831 - K16040 aip:107609507 439.884