Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0802 ATGGATTCTTCATCCATTTGCCCTTTCTGCCATTCATCAGTTCCATCTTCCCAACTGCAATGGCACGCCAACAATCACTTCGAACATGACGATCTCCAACGCGCTACTGATTTCGAGTTAGCTCAGCAACTCGCTCTTTCACCCAGTTCGCCTCCGAGAAAACAAGCAGCTAGTGGCTTGCATTCTGCTAAAACTCATGAAGGCTCTAATAATTGGTATAATGGCATTGTGGCTGGTAGACATAATGGAGCGTGGAAAGTGGATGAAAAGATCTCTTGTTTGGTTGATTTACAGAGAAAGAGTGAGTTTTACAAGATTGAAGCAGGTTTAATAGACTTGTTGAAAAACTGTTTGGAGTCTGAAGCAGAGAACTCAAGAACCATTTTGTCAGGTTATGTTGATCACTTCCAGAGCCTTGAGTTTGAGGATGTAGGATGGGGCTGTGGTTGGCGAAACCTTCAAATGCTCAGCTCACACTTGCTGGTACAGAGGCCACAAGCAAGAGAAGTCTTGTTTGGTGGTTCGGGATTTGTTCCTGATATATCTTCACTCCAGAGATGGCTTGAGATTGCTTGGGGAAGGGATTTTGATCCACCTGGTGCTGATCAATTCAATCATGCTGTTTATGGCTCGAGAAAATGGATAGGAACCACGGAGTGTGCTGCCCTGTTGCGTTCATTTGGTCTCCGAGCTAGAGTAGTCGATTTCGGTCCTAAAGAATATGAATCACTTTATCTATCTGTCCCAGGTTCAAGTGTTGGGGCACTGCAGCCACTGAGAACTAATAATTGGAGGAAGAGGAAAGCAATAATTTCTGGACCAATGGATAGGTATCTGTCTCGTACTGTTTCTCAATCAAGTTGTAGCCAGAAAGAGAACTCATGTTCTTCTCCCAATGACACTGATAGTAATGCCAACATAAGTAAGGGTCATCAAGCTCTCATGGACTTTGTTTGGAATTACTTTTCTAACAATAGCTCGATCCAATTTGGTCACAGGCGTGTTATTGTATGCGAGAAAACGCCCTTGTACTTTCAACATGATGGACATTCAAGAACAATAGTTGGAATTCAAGTCAAGCATCAACGGACAGGAACACTGCAATATAACCTCCTCATTCTTGATCCTGCTCATAAAACGGCTTCTCTAGAAAAATCACTTAGGGAGAAAGTTGGATGGCAGAGACTCGTAAAAAGAGGAATCCACACATTGAGGAAGCCACAATACCAGCTGTGTTATGTCGACCCTGGAATTGCAAGTGAGGAGGAGATGGAAAAACTCAAGACAATTGATAGTGTGTTCGTTGAAATTTAG 1314 0.4307 MDSSSICPFCHSSVPSSQLQWHANNHFEHDDLQRATDFELAQQLALSPSSPPRKQAASGLHSAKTHEGSNNWYNGIVAGRHNGAWKVDEKISCLVDLQRKSEFYKIEAGLIDLLKNCLESEAENSRTILSGYVDHFQSLEFEDVGWGCGWRNLQMLSSHLLVQRPQAREVLFGGSGFVPDISSLQRWLEIAWGRDFDPPGADQFNHAVYGSRKWIGTTECAALLRSFGLRARVVDFGPKEYESLYLSVPGSSVGALQPLRTNNWRKRKAIISGPMDRYLSRTVSQSSCSQKENSCSSPNDTDSNANISKGHQALMDFVWNYFSNNSSIQFGHRRVIVCEKTPLYFQHDGHSRTIVGIQVKHQRTGTLQYNLLILDPAHKTASLEKSLREKVGWQRLVKRGIHTLRKPQYQLCYVDPGIASEEEMEKLKTIDSVFVEI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0802 437 MobiDBLite consensus disorder prediction 284 306 - -
Amo07g0802 437 Gene3D - 112 417 - -
Amo07g0802 437 Pfam Peptidase family C78 125 412 IPR012462 -
Amo07g0802 437 PANTHER ZINC FINGER PROTEIN 2 437 - -
Amo07g0802 437 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 2 437 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0802 K24134 - gmx:100789113 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3009 17 133134428 133142024 Amo07g0802 07 12400615 12403940 hybridization
Amo07g0802 07 12400615 12403940 Amo17g3009 17 133134428 133142024 PCT