Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0750 ATGGGTTATTTATGTGACTTTTGTGGAGAGCAAAGGTCCTTGGTATACTGCCGCTCAGATGCTGCATCCTTATGTTTGTCGTGCGATCGGAATGTTCATTCTGCTAATGCCCTTTCTAAGCGCCATTCCAGGACCCTTGTATGTGAGAGATGTAACTCACAACCTGCTTTTATAAGATGTGCTGAGGAGAAAATTTCACTCTGTCAGAACTGTGACTGGCTTGGTCATGGTACCACTCCGTCTACTTCGGGGCATAAGAGGCAAACAATCAATTTATATTCTGGCTGCCCTTCAGCTGCAGAATTTTCTTCAATATGGTCCTTTTTCTCAGATATACCTGCCATGGGTGAAACATGTGAGCAGGAACTTGGTTTAATGAGCATTAGTGAGAACAGTGAAAAGAGTGCTTGGGTTCCTCCAGAAAACCAGAATGCTTCTAGTTCTGCTCAAGTGACCAATCTACCCGGCAAGGATAAATCTTGGGTTGGCACATCTTCAATGCCTGAGTCAAGCTCAGAACCTCGTATCATGGACCAGCCACCTGGACCTTCCAATGCATGCGTGCCTAAGTTATATTGTCCTGTGAAAACAACTCCTGCACTCTGTGAAGATGATGATAATCTATATGATGATTTCAACATGGATGAAGTGGATCTGGATCTTGAGAACTATGAGGAACTTTTTGGTGTGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTGATAGCTTATTTGGGACAAAGGAAATGTCTGCCAGTGCTGGGGACTCCAATTGTCAGGGCGCGGTTGCTGCTGAGGGCTCAACTGGATTAATCAATGCAACACAACCAGCATGCAGCAATGCTGCATCTGCAGATTCGATGATGAGCACTAAAACTGAACCAATTATTTGTTTTACTGGAAGGCAATCCCAATCGAACATTTCTTTTTCTGGTGCAACTAAAGATGGTGGTGGTGGTGGTGGTGGTGACTATCAAGACTGTGGGGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCCGAGAGCTCTATGCAATCTGCTAATCGCAGCAACGCTGTCATGCGTTATAAGGAAAAGAAAAAGACACGAAAGTTTGAAAAGCGAGTAAGGTATGCCTCTCGTAAGGCTAGGGCTGATGTCAGAAGGCGCGTGAAGGGCCGGTTTGTCAAAGCCGGTGATATCTATGACTACGACCCGATGAGCCAAACCAGAAGTTACTGA 1248 0.4551 MGYLCDFCGEQRSLVYCRSDAASLCLSCDRNVHSANALSKRHSRTLVCERCNSQPAFIRCAEEKISLCQNCDWLGHGTTPSTSGHKRQTINLYSGCPSAAEFSSIWSFFSDIPAMGETCEQELGLMSISENSEKSAWVPPENQNASSSAQVTNLPGKDKSWVGTSSMPESSSEPRIMDQPPGPSNACVPKLYCPVKTTPALCEDDDNLYDDFNMDEVDLDLENYEELFGVALSHSEELFENGGIDSLFGTKEMSASAGDSNCQGAVAAEGSTGLINATQPACSNAASADSMMSTKTEPIICFTGRQSQSNISFSGATKDGGGGGGGDYQDCGASSMLLMGEPPWCPPCPESSMQSANRSNAVMRYKEKKKTRKFEKRVRYASRKARADVRRRVKGRFVKAGDIYDYDPMSQTRSY* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0750 415 CDD Bbox1_BBX-like 4 47 - -
Amo07g0750 415 SMART bboxneu5 4 47 IPR000315 GO:0008270
Amo07g0750 415 SMART bboxneu5 48 90 IPR000315 GO:0008270
Amo07g0750 415 ProSiteProfiles CCT domain profile. 358 400 IPR010402 GO:0005515
Amo07g0750 415 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 415 - -
Amo07g0750 415 Pfam CCT motif 358 400 IPR010402 GO:0005515
Amo07g0750 415 MobiDBLite consensus disorder prediction 134 181 - -
Amo07g0750 415 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 415 - -
Amo07g0750 415 CDD Bbox1_BBX-like 47 90 - -
Amo07g0750 415 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Amo07g0750 415 MobiDBLite consensus disorder prediction 134 173 - -
Amo07g0750 415 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0750 Amo-Chr7 10433446 10438927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0750 1 415 C2C2-CO-like Transcription Factor Family AT5G48250 56.000 1.25e-146 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Amo07g0750 CCT 6.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0750 - - gmx:100783016 684.485